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5Y7T
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BU of 5y7t by Molmil
Quaternary complex of AsqJ-Fe3+-2OG-D-cyclopeptin
Descriptor: (3R)-4-methyl-3-(phenylmethyl)-1,3-dihydro-1,4-benzodiazepine-2,5-dione, 2-OXOGLUTARIC ACID, FE (III) ION, ...
Authors:Liao, H.J.
Deposit date:2017-08-18
Release date:2018-01-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Insights into the Desaturation of Cyclopeptin and its C3 Epimer Catalyzed by a non-Heme Iron Enzyme: Structural Characterization and Mechanism Elucidation.
Angew. Chem. Int. Ed. Engl., 57, 2018
5Y7R
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BU of 5y7r by Molmil
Quaternary complex of AsqJ-Fe3+-2OG-cyclopeptin
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, Iron/alpha-ketoglutarate-dependent dioxygenase asqJ, ...
Authors:Liao, H.J, Lin, T.S.
Deposit date:2017-08-17
Release date:2018-01-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Insights into the Desaturation of Cyclopeptin and its C3 Epimer Catalyzed by a non-Heme Iron Enzyme: Structural Characterization and Mechanism Elucidation.
Angew. Chem. Int. Ed. Engl., 57, 2018
6A2F
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BU of 6a2f by Molmil
Crystal structure of biosynthetic alanine racemase from Pseudomonas aeruginosa
Descriptor: ACETATE ION, Alanine racemase, biosynthetic, ...
Authors:Dong, H, Li, S.
Deposit date:2018-06-11
Release date:2018-08-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Enzymatic characterization and crystal structure of biosynthetic alanine racemase from Pseudomonas aeruginosa PAO1.
Biochem.Biophys.Res.Commun., 503, 2018
3ME9
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BU of 3me9 by Molmil
Crystal structure of SGF29 in complex with H3K4me3 peptide
Descriptor: GLYCEROL, Histone H3, SAGA-associated factor 29 homolog, ...
Authors:Bian, C, Tempel, W, Xu, C, Guo, Y, Dong, A, Crombet, L, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2010-03-31
Release date:2010-04-28
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation.
Embo J., 30, 2011
6BDE
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BU of 6bde by Molmil
Crystal structure of Fe(II) unliganded H-NOX protein mutant A71G from K. algicida
Descriptor: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bruegger, J.J, Hespen, C.W, Marletta, M.A.
Deposit date:2017-10-22
Release date:2018-05-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.641 Å)
Cite:Native Alanine Substitution in the Glycine Hinge Modulates Conformational Flexibility of Heme Nitric Oxide/Oxygen (H-NOX) Sensing Proteins.
ACS Chem. Biol., 13, 2018
6BDD
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BU of 6bdd by Molmil
Crystal structure of Fe(II) unliganded H-NOX protein from K. algicida
Descriptor: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bruegger, J.J, Hespen, C.W, Marletta, M.A.
Deposit date:2017-10-22
Release date:2018-05-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Native Alanine Substitution in the Glycine Hinge Modulates Conformational Flexibility of Heme Nitric Oxide/Oxygen (H-NOX) Sensing Proteins.
ACS Chem. Biol., 13, 2018
7V0E
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BU of 7v0e by Molmil
Crystal structure of the macro-oligomeric form of DNMT3B methyltransferase domain.
Descriptor: DNA (cytosine-5)-methyltransferase 3B, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Gao, L, Lu, J, Song, J.
Deposit date:2022-05-10
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.27016377 Å)
Cite:Structure of DNMT3B homo-oligomer reveals vulnerability to impairment by ICF mutations.
Nat Commun, 13, 2022
7UKL
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BU of 7ukl by Molmil
Cryo-EM structure of Antibody 12-16 in complex with prefusion SARS-CoV-2 Spike glycoprotein
Descriptor: 12-16 Fab Heavy Chain, 12-16 Fab Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Casner, R.G, Shapiro, L.
Deposit date:2022-04-01
Release date:2023-10-04
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Antibodies targeting a quaternary site on SARS-CoV-2 spike glycoprotein prevent viral receptor engagement by conformational locking.
Immunity, 56, 2023
7X86
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BU of 7x86 by Molmil
The crystal structure of PloI4-F124L in complex with endo-4+2 adduct
Descriptor: (4S,4aS,6aR,8R,9R,10aS,13S,14aS,18aR,18bR,E)-9-ethyl-4,8,19-trihydroxy-10a,12,13,18a-tetramethyl-2,3,4,4a,6a,7,8,9,10,10a,13,14,18a,18b-tetradecahydro-14a,17-(metheno)benzo[b]naphtho[2,1-h][1]azacyclododecine-16,18(1H,15H)-dione, PloI4
Authors:Li, M, Pan, L.F.
Deposit date:2022-03-11
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:A cyclase that catalyses competing 2 + 2 and 4 + 2 cycloadditions.
Nat.Chem., 15, 2023
7X80
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BU of 7x80 by Molmil
The crystal structure of PloI4-C16M/D46A/I137V
Descriptor: GLYCEROL, PloI4
Authors:Li, M, Pan, L.F.
Deposit date:2022-03-10
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:A cyclase that catalyses competing 2 + 2 and 4 + 2 cycloadditions.
Nat.Chem., 15, 2023
7X81
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BU of 7x81 by Molmil
The crystal structure of PloI4-C16M/D46A/I137V in complex with exo-2+2 adduct
Descriptor: (4S,4aS,6aR,8R,9R,11E,12aR,14aS,17E,18aR,18bR)-9-ethyl-4,8,19-trihydroxy-11,12a,13,18a-tetramethyl-2,3,4,4a,6a,7,8,9,10,12a,13,14,18a,18b-tetradecahydro-14a,17-(metheno)cyclobuta[b]naphtho[2,1-j][1]azacyclotetradecine-16,18(1H,15H)-dione, PloI4
Authors:Li, M, Pan, L.F.
Deposit date:2022-03-10
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:A cyclase that catalyses competing 2 + 2 and 4 + 2 cycloadditions.
Nat.Chem., 15, 2023
7X7Z
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BU of 7x7z by Molmil
The crystal structure of 2+2/4+2 cyclase PloI4
Descriptor: PloI4
Authors:Li, M, Pan, L.F.
Deposit date:2022-03-10
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.903 Å)
Cite:A cyclase that catalyses competing 2 + 2 and 4 + 2 cycloadditions.
Nat.Chem., 15, 2023
7V61
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BU of 7v61 by Molmil
ACE2 -Targeting Monoclonal Antibody as Potent and Broad-Spectrum Coronavirus Blocker
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3E8, ...
Authors:Yan, R.H, Zhang, Y.Y, Li, Y.N, Zhou, Q.
Deposit date:2021-08-18
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:ACE2-targeting monoclonal antibody as potent and broad-spectrum coronavirus blocker.
Signal Transduct Target Ther, 6, 2021
7D3C
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BU of 7d3c by Molmil
The newly emerged SARS-like coronavirus HCoV-EMC also has an "Achilles' heel": current effective inhibitor targeting a 3C-like protease
Descriptor: 3C-like proteinase, N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
Authors:Yan, L, Ren, Z.
Deposit date:2020-09-18
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The newly emerged SARS-like coronavirus HCoV-EMC also has an "Achilles' heel": current effective inhibitor targeting a 3C-like protease
Protein cell, 4, 2013
7X6S
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BU of 7x6s by Molmil
lymphocytic choriomeningitis virus RNA-dependent RNA polymerase (LCMV-L protein)
Descriptor: MANGANESE (II) ION, RNA-directed RNA polymerase L
Authors:Liu, L, Lou, Z.
Deposit date:2022-03-08
Release date:2023-09-13
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure basis for allosteric regulation of lymphocytic choriomeningitis virus polymerase function by Z matrix protein.
Protein Cell, 14, 2023
7X6V
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BU of 7x6v by Molmil
lymphocytic choriomeningitis virus polymerase- Matrix Z Protein Complex (LCMV L-Z Complex)
Descriptor: MANGANESE (II) ION, RING finger protein Z, RNA-directed RNA polymerase L, ...
Authors:Liu, L, Lou, Z.
Deposit date:2022-03-08
Release date:2023-09-13
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure basis for allosteric regulation of lymphocytic choriomeningitis virus polymerase function by Z matrix protein.
Protein Cell, 14, 2023

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PDB entries from 2024-05-15

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