Search by PDB author

Cryo-EM structure of BG24 inferred germline Fabs with germline CDR3s and 10-1074 Fabs in complex with HIV-1 Env immunogen BG505-SOSIPv4.1-GT1 - Class 1
Descriptor:	10-1074 Fab heavy chain, 10-1074 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:	Dam, K.A, Bjorkman, P.J.
Deposit date:	2022-03-25
Release date:	2022-10-26
Method:	ELECTRON MICROSCOPY (3.4 Å)
Cite:	HIV-1 CD4-binding site germline antibody-Env structures inform vaccine design. Nat Commun, 13, 2022

7UGQ

Cryo-EM structure of BG24 Fabs with an inferred germline CDRL1 and 10-1074 Fabs in complex with HIV-1 Env 6405-SOSIP.664
Descriptor:	10-1074 Fab heavy chain, 10-1074 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:	Dam, K.A, Bjorkman, P.J.
Deposit date:	2022-03-25
Release date:	2022-11-09
Method:	ELECTRON MICROSCOPY (3.4 Å)
Cite:	HIV-1 CD4-binding site germline antibody-Env structures inform vaccine design. Nat Commun, 13, 2022

7UGM

Crystal Structure of BG24-iGL CDR3mat Fab
Descriptor:	BG24-iGL CDR3mat Fab heavy chain, BG24-iGL CDR3mat Fab light chain
Authors:	Dam, K.A, Barnes, C.O, Bjorkman, P.J.
Deposit date:	2022-03-25
Release date:	2022-11-09
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.4 Å)
Cite:	HIV-1 CD4-binding site germline antibody-Env structures inform vaccine design. Nat Commun, 13, 2022

7UZ6

Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-28
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, M8a-28 Fab heavy chain, M8a-28 Fab light chain, ...
Authors:	Fan, C, Bjorkman, P.J.
Deposit date:	2022-05-08
Release date:	2022-12-07
Last modified:	2022-12-28
Method:	ELECTRON MICROSCOPY (2.8 Å)
Cite:	Neutralizing monoclonal antibodies elicited by mosaic RBD nanoparticles bind conserved sarbecovirus epitopes. Immunity, 55, 2022

7UZB

Structure of the SARS-CoV-2 S S1 doamin in complex with the mouse antibody Fab fragment, HSW-2
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, HSW-2 Fab heavy chain, HSW-2 Fab light chain, ...
Authors:	Fan, C, Bjorkman, P.J.
Deposit date:	2022-05-08
Release date:	2022-12-07
Last modified:	2022-12-28
Method:	ELECTRON MICROSCOPY (4.1 Å)
Cite:	Neutralizing monoclonal antibodies elicited by mosaic RBD nanoparticles bind conserved sarbecovirus epitopes. Immunity, 55, 2022

7UZ5

Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-6
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, M8a-6 Fab heavy chain, M8a-6 Fab light chain, ...
Authors:	Fan, C, Bjorkman, P.J.
Deposit date:	2022-05-08
Release date:	2022-12-07
Last modified:	2022-12-28
Method:	ELECTRON MICROSCOPY (3.2 Å)
Cite:	Neutralizing monoclonal antibodies elicited by mosaic RBD nanoparticles bind conserved sarbecovirus epitopes. Immunity, 55, 2022

7UZ7

Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-31
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, M8a-31 Fab heavy chain, ...
Authors:	Fan, C, Bjorkman, P.J.
Deposit date:	2022-05-08
Release date:	2022-12-07
Last modified:	2022-12-28
Method:	ELECTRON MICROSCOPY (2.9 Å)
Cite:	Neutralizing monoclonal antibodies elicited by mosaic RBD nanoparticles bind conserved sarbecovirus epitopes. Immunity, 55, 2022

7UZ9

Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-34
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, M8a-34 Fab heavy chain, M8a-34 Fab light chain, ...
Authors:	Fan, C, Bjorkman, P.J.
Deposit date:	2022-05-08
Release date:	2022-12-07
Last modified:	2022-12-28
Method:	ELECTRON MICROSCOPY (3.5 Å)
Cite:	Neutralizing monoclonal antibodies elicited by mosaic RBD nanoparticles bind conserved sarbecovirus epitopes. Immunity, 55, 2022

7UZ8

Structure of the SARS-CoV-2 Omicron BA.1 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-31
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, M8a-31 Fab heavy chain, ...
Authors:	Fan, C, Bjorkman, P.J.
Deposit date:	2022-05-08
Release date:	2022-12-07
Last modified:	2022-12-28
Method:	ELECTRON MICROSCOPY (3.1 Å)
Cite:	Neutralizing monoclonal antibodies elicited by mosaic RBD nanoparticles bind conserved sarbecovirus epitopes. Immunity, 55, 2022

7UZA

Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, HSW-1
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HSW-1 Fab heavy chain, ...
Authors:	Fan, C, Bjorkman, P.J.
Deposit date:	2022-05-08
Release date:	2022-12-07
Last modified:	2022-12-28
Method:	ELECTRON MICROSCOPY (3.1 Å)
Cite:	Neutralizing monoclonal antibodies elicited by mosaic RBD nanoparticles bind conserved sarbecovirus epitopes. Immunity, 55, 2022

7UZ4

Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-3
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, M8a-3 Fab heavy chain, ...
Authors:	Fan, C, Bjorkman, P.J.
Deposit date:	2022-05-08
Release date:	2022-12-07
Last modified:	2022-12-28
Method:	ELECTRON MICROSCOPY (3.1 Å)
Cite:	Neutralizing monoclonal antibodies elicited by mosaic RBD nanoparticles bind conserved sarbecovirus epitopes. Immunity, 55, 2022

7UZC

Structure of the SARS-CoV-2 RBD in complex with the mouse antibody Fab fragment, M8a-34
Descriptor:	M8a-34 Fab heavy chain, M8a-34 Fab light chain, Spike protein S1, ...
Authors:	Fan, C, Bjorkman, P.J.
Deposit date:	2022-05-08
Release date:	2023-01-11
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Neutralizing monoclonal antibodies elicited by mosaic RBD nanoparticles bind conserved sarbecovirus epitopes. Immunity, 55, 2022

7UZD

Structure of the SARS-CoV-2 RBD in complex with the mouse antibody Fab fragment, HSW-2
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HSW-2 Fab heavy chain, HSW-2 Fab light chain, ...
Authors:	Fan, C, Bjorkman, P.J.
Deposit date:	2022-05-08
Release date:	2023-01-11
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (3 Å)
Cite:	Neutralizing monoclonal antibodies elicited by mosaic RBD nanoparticles bind conserved sarbecovirus epitopes. Immunity, 55, 2022

7RKV

Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C118 (State 1)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, C118 Fab Heavy Chain, C118 Fab Light Chain, ...
Authors:	Barnes, C.O, Jette, C.A, Bjorkman, P.J.
Deposit date:	2021-07-22
Release date:	2021-09-22
Last modified:	2021-10-13
Method:	ELECTRON MICROSCOPY (3.45 Å)
Cite:	Broad cross-reactivity across sarbecoviruses exhibited by a subset of COVID-19 donor-derived neutralizing antibodies. Cell Rep, 36, 2021

7RKU

Structure of the SARS-CoV-2 receptor binding domain in complex with the human neutralizing antibody Fab fragment, C022
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, C022 Antibody Fab Heavy Chain, C022 Antibody Fab Light Chain, ...
Authors:	Jette, C.A, Bjorkman, P.J, Barnes, C.O.
Deposit date:	2021-07-22
Release date:	2021-09-22
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (3.2 Å)
Cite:	Broad cross-reactivity across sarbecoviruses exhibited by a subset of COVID-19 donor-derived neutralizing antibodies. Cell Rep, 36, 2021

7RKS

Structure of the SARS-CoV receptor binding domain in complex with the human neutralizing antibody Fab fragment, C118
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, C118 Antibody Fab Heavy Chain, ...
Authors:	Jette, C.A, Bjorkman, P.J, Barnes, C.O.
Deposit date:	2021-07-22
Release date:	2021-09-22
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	Broad cross-reactivity across sarbecoviruses exhibited by a subset of COVID-19 donor-derived neutralizing antibodies. Cell Rep, 36, 2021

7RFB

Crystal structure of broadly neutralizing antibody mAb1198 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:	Flyak, A.I, Bjorkman, P.J.
Deposit date:	2021-07-14
Release date:	2022-01-12
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	Analysis of antibodies from HCV elite neutralizers identifies genetic determinants of broad neutralization. Immunity, 55, 2022

7RFC

Crystal structure of broadly neutralizing antibody mAb1382 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:	Flyak, A.I, Bjorkman, P.J.
Deposit date:	2021-07-14
Release date:	2022-01-12
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (3.24 Å)
Cite:	Analysis of antibodies from HCV elite neutralizers identifies genetic determinants of broad neutralization. Immunity, 55, 2022

1P7Q

Crystal Structure of HLA-A2 Bound to LIR-1, a Host and Viral MHC Receptor
Descriptor:	Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
Authors:	Willcox, B.E, Thomas, L.M, Bjorkman, P.J.
Deposit date:	2003-05-05
Release date:	2003-10-14
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (3.4 Å)
Cite:	Crystal structure of HLA-A2 bound to LIR-1, a host and viral major histocompatibility complex receptor. Nat.Immunol., 4, 2003

5CAY

Envelope glycoprotein gp120 core from HIV type 2 bound to the first two domains of human soluble CD4 receptor
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120 core from ST strain of HIV-2, ...
Authors:	Davenport, Y.W, Bjorkman, P.J.
Deposit date:	2015-06-30
Release date:	2015-12-09
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (3 Å)
Cite:	Structure of an HIV-2 gp120 in Complex with CD4. J.Virol., 90, 2015

5CJX

Crystal structure of 8ANC195 Fab in complex with BG505 SOSIP.664 HIV-1 Env trimer
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 8ANC195 G52K5 heavy chain, ...
Authors:	Scharf, L, Bjorkman, P.J.
Deposit date:	2015-07-15
Release date:	2015-09-23
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (3.584 Å)
Cite:	Broadly Neutralizing Antibody 8ANC195 Recognizes Closed and Open States of HIV-1 Env. Cell, 162, 2015

5D4K

Crystal structure of the human polymeric Ig receptor (pIgR) ectodomain
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Polymeric immunoglobulin receptor, SULFATE ION, ...
Authors:	Stadtmueller, B.M, Bjorkman, P.J.
Deposit date:	2015-08-07
Release date:	2016-03-16
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (2.599 Å)
Cite:	The structure and dynamics of secretory component and its interactions with polymeric immunoglobulins. Elife, 5, 2016

5D6D

Crystal structure of GASDALIE IgG1 Fc in complex with FcgRIIIa
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region, Low affinity immunoglobulin gamma Fc region receptor III-A, ...
Authors:	Ahmed, A.A, Bjorkman, P.J.
Deposit date:	2015-08-12
Release date:	2016-02-10
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (3.13 Å)
Cite:	Structural characterization of GASDALIE Fc bound to the activating Fc receptor Fc gamma RIIIa. J.Struct.Biol., 194, 2016

5D4Q

Crystal structure of GASDALIE IgG1 Fc
Descriptor:	Ig gamma-1 chain C region, alpha-L-fucopyranose, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:	Ahmed, A.A, Bjorkman, P.J.
Deposit date:	2015-08-08
Release date:	2016-02-10
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (2.39 Å)
Cite:	Structural characterization of GASDALIE Fc bound to the activating Fc receptor Fc gamma RIIIa. J.Struct.Biol., 194, 2016

5T3Z

3.5 Angstrom Crystal Structure of a Fully and Natively Glycosylated BG505 SOSIP.664 HIV-1 Env Trimer in Complex with the Broadly Neutralizing Antibodies IOMA and 10-1074
Descriptor:	10-1074 Heavy Chain, 10-1074 Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:	Gristick, H.B, Bjorkman, P.J.
Deposit date:	2016-08-26
Release date:	2016-10-05
Last modified:	2023-10-04
Method:	X-RAY DIFFRACTION (3.5 Å)
Cite:	Natively glycosylated HIV-1 Env structure reveals new mode for antibody recognition of the CD4-binding site. Nat.Struct.Mol.Biol., 23, 2016

<1 2 3 4 567 8 9 10 >

Total results:	228
Displayed results:	25
Sorted by:	Hit score (from highest)