6TNP

Crystal structure of the ScFv-5E5 in complex with a Tn glycopeptide

Summary for 6TNP

Entry DOI	10.2210/pdb6tnp/pdb
Descriptor	Light chain of our ScFv-5E5, Heavy chain of our ScFv-5E5, (2~{S})-~{N}-[2-[[(2~{S})-1-[[(2~{S},3~{R})-3-[(2~{S},3~{R},4~{R},5~{R},6~{R})-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-1-[[(2~{S})-1-[(2~{S})-2-aminocarbonylpyrrolidin-1-yl]-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-butan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-propan-2-yl]amino]-2-oxidanylidene-ethyl]-1-[(2~{S})-2-azanylpropanoyl]pyrrolidine-2-carboxamide, ... (4 entities in total)
Functional Keywords	antibody, scfv, 5e5, anti-tn antibody, muc1, cancer, immune system
Biological source	Mus musculus (house mouse) More
Total number of polymer chains	12
Total formula weight	156140.52
Authors	Macias-Leon, J.,Corzana, F.,Hurtado-Guerrero, R. (deposition date: 2019-12-09, release date: 2020-11-18, Last modification date: 2024-01-24)
Primary citation	Macias-Leon, J.,Bermejo, I.A.,Asin, A.,Garcia-Garcia, A.,Companon, I.,Jimenez-Moreno, E.,Coelho, H.,Mangini, V.,Albuquerque, I.S.,Marcelo, F.,Asensio, J.L.,Bernardes, G.J.L.,Joshi, H.J.,Fiammengo, R.,Blixt, O.,Hurtado-Guerrero, R.,Corzana, F. Structural characterization of an unprecedented lectin-like antitumoral anti-MUC1 antibody. Chem.Commun.(Camb.), 56:15137-15140, 2020 Cited by PubMed: 33211039 DOI: 10.1039/d0cc06349e PDB entries with the same primary citation
Experimental method	X-RAY DIFFRACTION (3 Å)

Structure validation