6TCW

Crystal structure of Bacteroides thetaiotamicron EndoBT-3987 with Man5GlcNAc product

Summary for 6TCW

Entry DOI	10.2210/pdb6tcw/pdb
Descriptor	Endo-beta-N-acetylglucosaminidase F1, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ... (5 entities in total)
Functional Keywords	endo-b-n-acetylglucosaminidase, endobt, glycoside hydrolase, hydrolase
Biological source	Bacteroides thetaiotaomicron VPI-5482
Total number of polymer chains	1
Total formula weight	50397.91
Authors	Trastoy, B.,Du, J.J.,Klontz, E.H.,Cifuente, J.O.,Sundberg, E.J.,Guerin, M.E. (deposition date: 2019-11-06, release date: 2020-02-26, Last modification date: 2024-01-24)
Primary citation	Trastoy, B.,Du, J.J.,Klontz, E.H.,Li, C.,Cifuente, J.O.,Wang, L.X.,Sundberg, E.J.,Guerin, M.E. Structural basis of mammalian high-mannose N-glycan processing by human gut Bacteroides. Nat Commun, 11:899-899, 2020 Cited by PubMed: 32060313 DOI: 10.1038/s41467-020-14754-7 PDB entries with the same primary citation
Experimental method	X-RAY DIFFRACTION (1.599 Å)

Structure validation