3EVB
Crystal structure of yellow fever virus methyltransferase complexed with S-adenosyl-L-homocysteine
Summary for 3EVB
Entry DOI | 10.2210/pdb3evb/pdb |
Related | 3EVA 3EVC 3EVD 3EVE 3EVF 3EVG |
Descriptor | RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE (3 entities in total) |
Functional Keywords | yellow fever virus, ns5 methyltransferase, rna cap binding, atp-binding, capsid protein, cleavage on pair of basic residues, endoplasmic reticulum, envelope protein, glycoprotein, helicase, hydrolase, membrane, metal-binding, multifunctional enzyme, nucleotide-binding, nucleotidyltransferase, nucleus, phosphoprotein, protease, ribonucleoprotein, rna replication, rna-binding, rna-directed rna polymerase, secreted, serine protease, transmembrane, viral nucleoprotein, virion, transferase |
Biological source | Yellow fever virus |
Cellular location | Capsid protein C: Virion (Potential). Peptide pr: Secreted. Small envelope protein M: Virion membrane; Multi-pass membrane protein (Potential). Envelope protein E: Virion membrane; Multi- pass membrane protein (Potential). Non-structural protein 1: Secreted. Non-structural protein 2A-alpha: Host endoplasmic reticulum membrane; Multi-pass membrane protein (Potential). Non-structural protein 2A: Host endoplasmic reticulum membrane; Multi-pass membrane protein (Potential). Serine protease subunit NS2B: Host endoplasmic reticulum membrane; Peripheral membrane protein; Cytoplasmic side. Serine protease NS3: Host endoplasmic reticulum membrane; Peripheral membrane protein; Cytoplasmic side (By similarity). Non-structural protein 4A: Host endoplasmic reticulum membrane; Multi-pass membrane protein (By similarity). Non-structural protein 4B: Host endoplasmic reticulum membrane; Multi-pass membrane protein (By similarity). RNA-directed RNA polymerase NS5: Host endoplasmic reticulum membrane; Peripheral membrane protein; Cytoplasmic side (By similarity): P03314 |
Total number of polymer chains | 1 |
Total formula weight | 31675.22 |
Authors | Thompson, A.A.,Geiss, B.J.,Peersen, O.B. (deposition date: 2008-10-13, release date: 2009-01-06, Last modification date: 2023-09-06) |
Primary citation | Geiss, B.J.,Thompson, A.A.,Andrews, A.J.,Sons, R.L.,Gari, H.H.,Keenan, S.M.,Peersen, O.B. Analysis of flavivirus NS5 methyltransferase cap binding. J.Mol.Biol., 385:1643-1654, 2009 Cited by PubMed: 19101564DOI: 10.1016/j.jmb.2008.11.058 PDB entries with the same primary citation |
Experimental method | X-RAY DIFFRACTION (1.85 Å) |
Structure validation
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