2NAR

Solution structure of AVR3a_60-147 from Phytophthora infestans

> Summary

Summary for 2NAR

DescriptorEffector protein Avr3a
Functional Keywordsprotein binding
Biological sourcePhytophthora infestans (potato late blight fungus)
Total number of polymer chains1
Total molecular weight11511.18
Authors
Matena, A.,Bayer, P.,Zhukov, I.,Stanek, J.,Kozminski, W.,van West, P.,Wawra, S. (deposition date: 2016-01-08, release date: 2017-01-11)
Primary citation
Matena, A.,Bayer, P.,Zhukov, I.,Stanek, J.,Kozminski, W.,van West, P.,Wawra, S.
Solution structure of the effector protein AVR3a_60-147 from Phythophthora infestans
To be Published,
Experimental method
SOLUTION NMR
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Structure validation

ClashscoreRamachandran outliersSidechain outliers121.7%28.6%MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all NMR structures

More Asymmetric unit images

Molmil generated image of 2nar
no rotation
Molmil generated image of 2nar
rotated about x axis by 90°
Molmil generated image of 2nar
rotated about y axis by 90°

> Structural details

Sequence viewer

Contents of the asymmetric unit

PolymersNumber of chains1
Total molecular weight11511.2
Non-Polymers*Number of molecules0
Total molecular weight0.0
All*Total molecular weight11511.2
*Water molecules are not included.

> Experimental details

Spectrometer

Experimental method:SOLUTION NMR

Spectrometer IDSpectrometer makerSpectrometer modelSpectrometer typeSpectrometer field strength
1BrukerAvanceBruker Avance700
2VarianVNMRSVarian VNMRS700

Experiment

experiment idconditions idsolution idExperiment type
1112D 1H-15N HSQC
2112D 1H-1H COSY
3112D 1H-1H TOCSY
4112D 1H-1H NOESY
5113D HCCH-COSY
6113D HCCH-TOCSY
7113D HBHANH
8113D HBHA(CO)NH
91113C-NOESY-HSQC
101115N-NOESY-HSQC
11113D HNCO
12114D HNCOCA
13114D HNCACO
14114D HBHACBCANH

NMR Sample

conditions idNMR sample pHNMR sample pressureNMR sample temperature
16.5ambient298

Conformers

Conformers Calculated Total Number100
Conformers Submitted Total Number10

> Functional details

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Functional Information from GO Data

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Functional Information from PDB Data

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Functional Information from PDB atom coordinates for the "HETATM" binding sites

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Functional Information from PROSITE/UniProt

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Functional Information from SwissProt/UniProt

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Catalytic Information from CSA

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> Sequence Neighbor

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