8QU2
NF-YB/C Heterodimer in Complex with a 16-mer NF-YA-derived Peptide Stabilized with C8-Hydrocarbon Linker
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Nuclear transcription factor Y subunit alpha | polymer | 18 | 2061.6 | 1 | UniProt (P23511) In PDB | Homo sapiens | CAAT box DNA-binding protein subunit A,Nuclear transcription factor Y subunit A,NF-YA |
2 | B | Nuclear transcription factor Y subunit beta | polymer | 95 | 10876.5 | 1 | UniProt (P25208) Pfam (PF00808) In PDB | Homo sapiens (human) | CAAT box DNA-binding protein subunit B,Nuclear transcription factor Y subunit B,NF-YB |
3 | C | Nuclear transcription factor Y subunit gamma | polymer | 96 | 11258.2 | 1 | UniProt (Q13952) Pfam (PF00125) In PDB | Homo sapiens (human) | CAAT box DNA-binding protein subunit C,Nuclear transcription factor Y subunit C,NF-YC,Transactivator HSM-1/2 |
4 | A | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 1 | Chemie (TRS) | |||
5 | A, B | FORMIC ACID | non-polymer | 46.0 | 2 | Chemie (FMT) | |||
6 | C | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
7 | water | water | 18.0 | 139 | Chemie (HOH) |
Sequence modifications
A: 270 - 285 (UniProt: P23511)
B: 51 - 143 (UniProt: P25208)
C: 27 - 120 (UniProt: Q13952)
PDB | External Database | Details |
---|---|---|
Ace 269 | - | acetylation |
Nle 272 | Tyr 272 | engineered mutation |
Nh2 286 | - | amidation |
PDB | External Database | Details |
---|---|---|
Gly 49 | - | expression tag |
Pro 50 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly 25 | - | expression tag |
Pro 26 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 24196.3 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 338.3 | |
All* | Total formula weight | 24534.6 |