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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

8OTZ

48-nm repeat of the native axonemal doublet microtubule from bovine sperm

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
10, VCilia- and flagella-associated protein 95polymer23226661.02UniProt (Q32L77)
Pfam (PF15139)
In PDB		Bos taurus (cattle)
20A, 0C, 0E, 0G, 0W...Sperm acrosome associated 9polymer22425174.829UniProt (A0A3Q1MYU9)
Pfam (PF15120)
In PDB		Bos taurus (cattle)
31, 2, xTestis specific serine kinase 6polymer27330256.93UniProt (F1N2S7)
Pfam (PF00069)
In PDB		Bos taurus (cattle)
43, y, zEF-hand domain-containing proteinpolymer27531349.93UniProt (G5E5A3)
Pfam (PF08976)
Pfam (PF13499)
In PDB		Bos taurus (cattle)
5A, B, CATP6V1F neighborpolymer17620279.73UniProt (G3X8G1)
In PDB		Bos taurus (cattle)
6A0, BNOuter dense fiber of sperm tails 3 like 1polymer27430860.92Bos taurus (cattle)
7A1, A2, A3, A4, A5...Outer dense fiber of sperm tails 3polymer25427684.914UniProt (G3X6A7)
Pfam (PF07004)
In PDB		Bos taurus (cattle)
8AA, AC, AE, AG, AI...Tubulin alpha-3 chainpolymer45049978.3149UniProt (Q32KN8)
Pfam (PF00091)
Pfam (PF03953)
In PDB		Bos taurus (cattle)Alpha-tubulin 3
9AB, AD, AF, AH, AJ...Tubulin beta-4B chainpolymer44549877.8153UniProt (Q3MHM5)
Pfam (PF00091)
Pfam (PF03953)
In PDB		Bos taurus (cattle)Tubulin beta-2C chain
10AP, AQ, AR, ASProtein Flattoppolymer19621214.04Bos taurus (cattle)
11AT, AUCilia- and flagella-associated protein 53polymer51462139.02UniProt (F1N7G5)
Pfam (PF13868)
In PDB		Bos taurus (cattle)
12AV, AWNucleoside diphosphate kinase 7polymer37742650.92UniProt (Q5E9Y9)
Pfam (PF00334)
In PDB		Bos taurus (cattle)NDK 7,NDP kinase 7
13Aa, Ab, Ac, AdEF-hand domain-containing family member C2polymer73385566.84UniProt (A0A3Q1N1R0)
Pfam (PF06565)
In PDB		Bos taurus (cattle)
14Al, Am, An, Ao, B7...Family with sequence similarity 166 member Apolymer32036251.414UniProt (G3X6E2)
Pfam (PF10629)
In PDB		Bos taurus (cattle)
15Ap, Aq, ArProtein FAM166Cpolymer20123414.63UniProt (Q3SZR5)
Pfam (PF10629)
In PDB		Bos taurus (cattle)
16At, AxOuter dense fiber of sperm tails 3Bpolymer30332579.92Bos taurus (cattle)
17B0, B1, B2, B3, B4...Spermatid-specific manchette-related protein 1polymer30435109.010UniProt (Q32KP0)
Pfam (PF15181)
In PDB		Bos taurus (cattle)Ciliated bronchial epithelial protein 1
18B5, B6, By, BzEnkurinpolymer25930215.14UniProt (E1B836)
Pfam (PF13864)
In PDB		Bos taurus (cattle)
19BO, BP, BQ, BRCoiled-coil domain-containing protein 105polymer50057747.84UniProt (Q2YDN4)
Pfam (PF03148)
In PDB		Bos taurus (cattle)
20BS, BTProtein phosphatase 1 regulatory subunit 32polymer42847818.12UniProt (Q2T9T0)
Pfam (PF15691)
In PDB		Bos taurus (cattle)
21BU, BV, Bi, Bj, BkRIB43A-like with coiled-coils protein 2polymer37744773.45UniProt (Q32LJ7)
Pfam (PF05914)
In PDB		Bos taurus (cattle)
22BW, BXCilia- and flagella-associated protein 107polymer19623271.52UniProt (Q2TA11)
In PDB		Bos taurus (cattle)
23Bf, BgPiercer of microtubule wall 1 proteinpolymer13615673.52UniProt (Q32P67)
Pfam (PF14892)
In PDB		Bos taurus (cattle)Pierce1,UPF0691 protein C9orf116 homolog
24BhPiercer of microtubule wall 2 proteinpolymer12013784.51UniProt (A0A3Q1LFK7)
Pfam (PF14892)
In PDB		Bos taurus (cattle)
25Bl, Bm, Bn, Bo, BpStabilizer of axonemal microtubules 1polymer47740613.15Bos taurus (cattle)
26Bq, BuStabilizer of axonemal microtubules 3polymer33837465.42Bos taurus (cattle)
27Br, BsMeiosis-specific nuclear structural protein 1polymer49560538.42UniProt (Q2KIQ2)
Pfam (PF13868)
In PDB		Bos taurus (cattle)
28C0, C2, C3, C4, C5...Tektin-3polymer49056760.915UniProt (A6H782)
Pfam (PF03148)
In PDB		Bos taurus (cattle)
29C1, Cz, D0, D1, D2...Tektin-5polymer48956564.826UniProt (Q2YDI7)
Pfam (PF03148)
In PDB		Bos taurus (cattle)
30CWSperm-associated antigen 8polymer48451604.41UniProt (E1BNS6)
In PDB		Bos taurus (cattle)
31ClSpermatogenesis-associated protein 48polymer44049735.21Bos taurus (cattle)
32Cm, Cn, Co, CpTektin-1polymer41848798.44UniProt (Q32KZ9)
Pfam (PF03148)
In PDB		Bos taurus (cattle)
33Cq, Cr, Cs, Ct, Cu...Tektin-2polymer43049962.79UniProt (Q2T9Q6)
Pfam (PF03148)
In PDB		Bos taurus (cattle)
34DUncharacterized protein C1orf100 homologpolymer13816642.11UniProt (Q32L72)
Pfam (PF17670)
In PDB		Bos taurus (cattle)
35DY, DZ, Da, EeTEPP proteinpolymer21624939.44UniProt (C9QNT9)
In PDB		Bos taurus (cattle)Testis,prostate and placenta expressed
36Db, Dc, DdUncharacterized protein MGC137036polymer19221238.13UniProt (A0A3Q1LFG5)
In PDB		Bos taurus (cattle)
37DeTestis expressed 33polymer27230322.61UniProt (Q32LI7)
Pfam (PF15400)
In PDB		Bos taurus (cattle)Uncharacterized protein MGC133880
38Df, Dg, DhTestis-expressed sequence 37 proteinpolymer18020375.13UniProt (A5PJD8)
Pfam (PF15217)
In PDB		Bos taurus (cattle)
39Di, Dj, Dk, DlTestis-expressed protein 43polymer13315209.74UniProt (A8SMG2)
Pfam (PF14983)
In PDB		Bos taurus (cattle)
40DmTestis expressed 49polymer13115441.41UniProt (A0A3Q1MT14)
In PDB		Bos taurus (cattle)
41DnTheg spermatid protein likepolymer45050941.51UniProt (A0A3Q1MNS9)
Pfam (PF14912)
In PDB		Bos taurus (cattle)
42E, FEF-hand domain-containing family member Bpolymer87797960.52UniProt (F1MMV1)
Pfam (PF13499)
In PDB		Bos taurus (cattle)Cilia- and flagella-associated protein 21
43E1, E2, E3, E4Tektin bundle interacting protein 1polymer20824559.54UniProt (F1MZJ1)
Pfam (PF15041)
In PDB		Bos taurus (cattle)
44ES, ET, EU, EV, EW...Tektin-4polymer44752025.58UniProt (Q2TA38)
Pfam (PF03148)
In PDB		Bos taurus (cattle)
45GChromosome 7 open reading frame 31polymer58467685.61Bos taurus (cattle)
46H, oCilia- and flagella- associated protein 210polymer54765437.62UniProt (E1BJL9)
Pfam (PF13868)
In PDB		Bos taurus (cattle)
47I, X, YEF-hand domain-containing protein 1polymer64074125.33UniProt (E1BKH1)
Pfam (PF06565)
In PDB		Bos taurus (cattle)Myoclonin-1
48J, K, L, MUncharacterized protein C10orf82 homologpolymer23526677.04UniProt (A6QPC0)
In PDB		Bos taurus (cattle)
49K1Cilia- and flagella-associated protein 144polymer13516178.31UniProt (A8QW39)
Pfam (PF14886)
In PDB		Bos taurus (cattle)Protein FAM183A
50L1, L2Chromosome 20 C5orf49 homologpolymer14716820.82UniProt (A0A3Q1LU45)
Pfam (PF15074)
In PDB		Bos taurus (cattle)
51N, OChromosome 19 C17orf98 homologpolymer15417813.22UniProt (E1BC62)
Pfam (PF15075)
In PDB		Bos taurus (cattle)
52PChromosome 13 C20orf85 homologpolymer13715810.21UniProt (A0A3S5ZPE5)
Pfam (PF14945)
In PDB		Bos taurus (cattle)
53QCilia- and flagella-associated protein 68polymer16920163.31UniProt (Q2T9Q3)
Pfam (PF06608)
In PDB		Bos taurus (cattle)
54R, S, T, UCilia and flagella associated protein 77polymer28432999.24UniProt (A0A3Q1LJD6)
Pfam (PF14825)
In PDB		Bos taurus (cattle)
55WUPF0602 protein C4orf47 homologpolymer30934554.41UniProt (Q2T9M0)
Pfam (PF15239)
In PDB		Bos taurus (cattle)
56XG, XH, XI, XJ, XK...Cilia- and flagella-associated protein 20polymer19322781.47UniProt (Q6B857)
Pfam (PF05018)
In PDB		Bos taurus (cattle)
57YG, YH, YI, YJ, YK...Parkin coregulated gene proteinpolymer25729323.16UniProt (A5PK71)
Pfam (PF10274)
In PDB		Bos taurus (cattle)
58Z, p, qCFAP97 domain containing 1polymer16419600.43UniProt (G3N1Q7)
Pfam (PF13879)
In PDB		Bos taurus (cattle)
59a, b, c, dCilia- and flagella-associated protein 45polymer54965800.34UniProt (Q32LN4)
Pfam (PF13868)
In PDB		Bos taurus (cattle)
60e, f, gCilia- and flagella-associated protein 52polymer62368719.63UniProt (E1BKF9)
Pfam (PF00400)
In PDB		Bos taurus (cattle)
61hCilia- and flagella-associated protein 141polymer10112361.41UniProt (Q32L75)
Pfam (PF15104)
In PDB		Bos taurus (cattle)
62i, jCilia- and flagella-associated protein 161polymer32136519.62UniProt (F6RJC2)
In PDB		Bos taurus (cattle)
63k, l, m, nDual specificity phosphatase 21polymer19622075.64UniProt (Q0II40)
Pfam (PF00782)
In PDB		Bos taurus (cattle)Similar to Dual specificity protein phosphatase 18 (Low molecular weight dual specificity phosphatase 20)
64keUncharacterized protein C4orf45 homologpolymer19722640.91UniProt (Q2KIR0)
Pfam (PF15123)
In PDB		Bos taurus (cattle)
65r, s, tCilia- and flagella-associated protein 276polymer17019387.83UniProt (E1B9I5)
Pfam (PF12494)
In PDB		Bos taurus (cattle)
66u, v, wEF-hand calcium-binding domain-containing protein 3polymer43850208.03UniProt (Q2T9P0)
In PDB		Bos taurus (cattle)
67PI, TI, WG, BC, CG...GUANOSINE-5'-TRIPHOSPHATEnon-polymer523.2149Chemie (GTP)
68GG, IO, LI, QM, WG...MAGNESIUM IONnon-polymer24.3149Chemie (MG)
69HL, KF, MN, OD, SD...GUANOSINE-5'-DIPHOSPHATEnon-polymer443.2153Chemie (GDP)
Sequence modifications
C1, Cz, D0, D1, D2, D3, D4, D5, D6, D7, D8, D9, DP, DQ, DR, DS, DT, DU, DV, DW, DX, EA, EO, EP, EQ, ER: 1 - 489 (UniProt: Q2YDI7)
PDBExternal DatabaseDetails
Asp 245Glu 245variant
W: 1 - 309 (UniProt: Q2T9M0)
PDBExternal DatabaseDetails
Pro 199Thr 199variant
u, v, w: 1 - 438 (UniProt: Q2T9P0)
PDBExternal DatabaseDetails
Ala 290Glu 290variant
Ser 303Thr 303variant
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains575
Total formula weight25611019.3
Non-Polymers*Number of molecules451
Total formula weight149385.0
All*Total formula weight25760404.3
*Water molecules are not included.

219869

PDB entries from 2024-05-15

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