8E0P
Crystal structure of mouse APCDD1 in fusion with engineered MBP
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D | Maltodextrin-binding protein, Protein APCDD1 complex | polymer | 818 | 91658.3 | 4 | UniProt (C3SHQ8) UniProt (Q3U128) Pfam (PF01547) Pfam (PF14921) In PDB | Escherichia coli | Adenomatosis polyposis coli down-regulated 1 protein homolog |
| 2 | F, G, H, I | alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose | branched | 342.3 | 4 | In PDB GlyTouCan (G66120GK) | |||
| 3 | D, A, B, C | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 12 | Chemie (NAG) | |||
| 4 | C, A | PALMITIC ACID | non-polymer | 256.4 | 2 | Chemie (PLM) | |||
| 5 | D, A, B, C | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) | |||
| 6 | D, A, B | CHLORIDE ION | non-polymer | 35.5 | 3 | Chemie (CL) | |||
| 7 | D, C | 3-[BENZYL(DIMETHYL)AMMONIO]PROPANE-1-SULFONATE | non-polymer | 257.3 | 3 | Chemie (DMX) | |||
| 8 | water | water | 18.0 | 643 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 6 - 369 (UniProt: C3SHQ8)
A, B, C, D: 373 - 809 (UniProt: Q3U128)
| PDB | External Database | Details |
|---|---|---|
| Glu 1 | - | expression tag |
| Thr 2 | - | expression tag |
| Gly 3 | - | expression tag |
| Lys 4 | - | expression tag |
| Thr 5 | - | expression tag |
| Ala 85 | Asp 108 | engineered mutation |
| Ala 86 | Lys 109 | engineered mutation |
| Ala 175 | Glu 198 | engineered mutation |
| Ala 176 | Asn 199 | engineered mutation |
| His 218 | Ala 241 | engineered mutation |
| His 222 | Lys 245 | engineered mutation |
| Ala 242 | Lys 265 | engineered mutation |
| Val 315 | Ala 338 | engineered mutation |
| Val 320 | Ile 343 | engineered mutation |
| Ala 362 | Glu 385 | engineered mutation |
| Ala 365 | Lys 388 | engineered mutation |
| Ala 366 | Asp 389 | engineered mutation |
| Asn 370 | - | linker |
| Ala 371 | - | linker |
| Ala 372 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Thr 810 | - | expression tag |
| His 811 | - | expression tag |
| His 812 | - | expression tag |
| His 813 | - | expression tag |
| His 814 | - | expression tag |
| His 815 | - | expression tag |
| His 816 | - | expression tag |
| His 817 | - | expression tag |
| His 818 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 366633.2 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 1369.2 | |
| Non-Polymers* | Number of molecules | 25 |
| Total formula weight | 4506.2 | |
| All* | Total formula weight | 372508.6 |
