8CM5
W-formate dehydrogenase C872A from Desulfovibrio vulgaris
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, K, R | Formate dehydrogenase, alpha subunit, selenocysteine-containing | polymer | 1013 | 112405.0 | 4 | UniProt (Q72EJ1) Pfam (PF04879) Pfam (PF00384) Pfam (PF01568) In PDB | Desulfovibrio vulgaris str. Hildenborough | |
| 2 | B, D, L, S | Formate dehydrogenase, beta subunit, putative | polymer | 215 | 23989.5 | 4 | UniProt (Q72EJ0) Pfam (PF13247) In PDB | Desulfovibrio vulgaris str. Hildenborough | |
| 3 | L, A, C, S, D | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 6 | Chemie (PEG) | |||
| 4 | K, A, R, C | HYDROSULFURIC ACID | non-polymer | 34.1 | 4 | Chemie (H2S) | |||
| 5 | K, A, R, C | TUNGSTEN ION | non-polymer | 183.8 | 4 | Chemie (W) | |||
| 6 | K, A, R, C | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE | non-polymer | 740.6 | 8 | Chemie (MGD) | |||
| 7 | D, K, L, A, B... | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 16 | Chemie (SF4) | |||
| 8 | S | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 9 | water | water | 18.0 | 963 | Chemie (HOH) |
Sequence modifications
A, C, K, R: 1 - 1005 (UniProt: Q72EJ1)
| PDB | External Database | Details |
|---|---|---|
| Ala 872 | Cys 872 | engineered mutation |
| Trp 1006 | - | expression tag |
| Ser 1007 | - | expression tag |
| His 1008 | - | expression tag |
| Pro 1009 | - | expression tag |
| Gln 1010 | - | expression tag |
| Phe 1011 | - | expression tag |
| Glu 1012 | - | expression tag |
| Lys 1013 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 545577.9 | |
| Non-Polymers* | Number of molecules | 39 |
| Total formula weight | 13151.2 | |
| All* | Total formula weight | 558729.1 |
