8CKL
Semaphorin-5A TSR 3-4 domains in complex with sucrose octasulfate (SOS)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Semaphorin-5A | polymer | 125 | 14054.7 | 2 | UniProt (Q13591) Pfam (PF00090) In PDB | Homo sapiens (human) | Semaphorin-F,Sema F |
| 2 | H | 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose-(1-2)-1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose | branched | 982.8 | 1 | In PDB BIRD (PRD_900013) | |||
| 3 | A, B | alpha-D-mannopyranose | non-polymer | 180.2 | 4 | Chemie (MAN) |
Sequence modifications
A, B: 652 - 765 (UniProt: Q13591)
| PDB | External Database | Details |
|---|---|---|
| Glu 649 | - | expression tag |
| Thr 650 | - | expression tag |
| Gly 651 | - | expression tag |
| Gly 766 | - | expression tag |
| Thr 767 | - | expression tag |
| Leu 768 | - | expression tag |
| Glu 769 | - | expression tag |
| Val 770 | - | expression tag |
| Leu 771 | - | expression tag |
| Phe 772 | - | expression tag |
| Gln 773 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 28109.4 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 982.8 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 720.6 | |
| All* | Total formula weight | 29812.8 |
