8BET
Structure of D188A-fructofuranosidase from Rhodotorula dairenesis in complex with sucrose
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D | Beta-fructofuranosidase | polymer | 675 | 70671.3 | 4 | UniProt (A0A856TAI5) Pfam (PF00251) Pfam (PF08244) In PDB | Rhodotorula dairenensis | |
| 2 | E, H, K | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
| 3 | F, I, J | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 3 | In PDB GlyTouCan (G15407YE) | |||
| 4 | G | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 1 | In PDB GlyTouCan (G56014GC) | |||
| 5 | L, M, N, O | beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose | branched | 342.3 | 4 | In PDB BIRD (PRD_900003) | |||
| 6 | B, C, A, D | alpha-D-mannopyranose | non-polymer | 180.2 | 14 | Chemie (MAN) | |||
| 7 | D, B, C, A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 26 | Chemie (NAG) | |||
| 8 | water | water | 18.0 | 694 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 675 (UniProt: A0A856TAI5)
| PDB | External Database | Details |
|---|---|---|
| Ala 188 | Asp 188 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 282685.1 | |
| Branched | Number of molecules | 11 |
| Total formula weight | 5475.0 | |
| Non-Polymers* | Number of molecules | 40 |
| Total formula weight | 8273.6 | |
| All* | Total formula weight | 296433.6 |
