7ZCY
Sporosarcina pasteurii urease (SPU) co-crystallized in the presence of an Ebselen-derivative and bound to Se atoms
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Urease subunit gamma | polymer | 100 | 11134.9 | 1 | UniProt (P41022) Pfam (PF00547) In PDB | Sporosarcina pasteurii | Urea amidohydrolase subunit gamma |
2 | B | Urease subunit beta | polymer | 122 | 13529.1 | 1 | UniProt (P41021) Pfam (PF00699) In PDB | Sporosarcina pasteurii | Urea amidohydrolase subunit beta |
3 | C | Urease subunit alpha | polymer | 570 | 61575.6 | 1 | UniProt (P41020) Pfam (PF00449) Pfam (PF01979) In PDB | Sporosarcina pasteurii | Urea amidohydrolase subunit alpha |
4 | C, A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 20 | Chemie (EDO) | |||
5 | A, B, C | SULFATE ION | non-polymer | 96.1 | 8 | Chemie (SO4) | |||
6 | C | NICKEL (II) ION | non-polymer | 58.7 | 2 | Chemie (NI) | |||
7 | C | HYDROXIDE ION | non-polymer | 17.0 | 1 | Chemie (OH) | |||
8 | C | N-(2-chloranyl-4-fluoranyl-phenyl)-2-selanyl-benzamide | non-polymer | 328.6 | 1 | Chemie (IU9) | |||
9 | C | SELENIUM ATOM | non-polymer | 79.0 | 2 | Chemie (SE) | |||
10 | water | water | 18.0 | 767 | Chemie (HOH) |
Sequence modifications
A: 1 - 100 (UniProt: P41022)
C: 1 - 570 (UniProt: P41020)
PDB | External Database | Details |
---|---|---|
Ala 20 | Leu 20 | variant |
Lys 22 | Arg 22 | variant |
PDB | External Database | Details |
---|---|---|
Tyr 35 | - | insertion |
- | Val 42 | deletion |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 86239.6 | |
Non-Polymers* | Number of molecules | 34 |
Total formula weight | 2630.8 | |
All* | Total formula weight | 88870.4 |