7Z9M
E.coli gyrase holocomplex with 217 bp DNA and Albi-1 (site AA)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C | DNA gyrase subunit A | polymer | 881 | 97854.3 | 2 | UniProt (P0AES4) Pfam (PF00521) Pfam (PF03989) In PDB | Escherichia coli str. K-12 substr. MG1655 | |
| 2 | B, D | DNA gyrase subunit B | polymer | 811 | 90891.7 | 2 | UniProt (P0AES6) Pfam (PF01751) Pfam (PF21249) Pfam (PF18053) Pfam (PF00986) Pfam (PF02518) Pfam (PF00204) In PDB | Escherichia coli str. K-12 substr. MG1655 | Type IIA topoisomerase subunit GyrB |
| 3 | E | DNA (5'-D(P*AP*AP*AP*TP*CP*TP*GP*TP*GP*CP*GP*GP*GP*T)-3') | polymer | 14 | 4335.8 | 1 | Escherichia phage Mu | ||
| 4 | F | DNA (5'-D(P*AP*GP*AP*AP*TP*CP*AP*GP*GP*CP*AP*TP*AP*A)-3') | polymer | 14 | 4321.9 | 1 | Escherichia phage Mu | ||
| 5 | G | DNA (5'-D(*AP*AP*TP*CP*AP*CP*CP*CP*GP*CP*AP*CP*AP*GP*AP*TP*TP*T)-3') | polymer | 18 | 5444.6 | 1 | Escherichia phage Mu | ||
| 6 | H | DNA (5'-D(*GP*AP*TP*TP*TP*TP*AP*TP*GP*CP*CP*TP*GP*AP*TP*TP*CP*T)-3') | polymer | 18 | 5487.6 | 1 | Escherichia phage Mu | ||
| 7 | A | 4-[[4-[[5-[[(2S)-2-[[5-[(4-cyanophenyl)carbonylamino]pyridin-2-yl]carbonylamino]-3-(1H-1,2,3-triazol-4-yl)propanoyl]amino]pyridin-2-yl]carbonylamino]-2-oxidanyl-3-propan-2-yloxy-phenyl]carbonylamino]benzoic acid | non-polymer | 837.8 | 1 | Chemie (IL1) | |||
| 8 | B, D | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 9 | water | water | 18.0 | 10 | Chemie (HOH) |
Sequence modifications
A, C: 2 - 875 (UniProt: P0AES4)
B, D: 2 - 804 (UniProt: P0AES6)
| PDB | External Database | Details |
|---|---|---|
| Ser 1 | - | expression tag |
| Leu 876 | - | expression tag |
| Glu 877 | - | expression tag |
| Val 878 | - | expression tag |
| Leu 879 | - | expression tag |
| Phe 880 | - | expression tag |
| Gln 881 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly 0 | - | expression tag |
| Pro 1 | - | expression tag |
| Glu 805 | - | expression tag |
| Asn 806 | - | expression tag |
| Leu 807 | - | expression tag |
| Tyr 808 | - | expression tag |
| Phe 809 | - | expression tag |
| Gln 810 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 397081.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 886.4 | |
| All* | Total formula weight | 397968.3 |
