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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

7Z3O

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1126S rRNApolymer33371078730.11Thermochaetoides thermophila DSM 1495
2218S rRNApolymer1796578772.51Thermochaetoides thermophila DSM 1495
335S rRNApolymer12038596.91Thermochaetoides thermophila DSM 1495
445.8S rRNApolymer15650147.71Thermochaetoides thermophila DSM 1495
5APutative guanine nucleotide-binding proteinpolymer31635149.61UniProt (G0S9U0)
Pfam (PF00400)
In PDB		Thermochaetoides thermophila DSM 1495
6BHABP4_PAI-RBP1 domain-containing proteinpolymer30232667.91UniProt (G0S428)
Pfam (PF09598)
Pfam (PF04774)
In PDB		Thermochaetoides thermophila DSM 1495
7CPutative ribosome associated proteinpolymer44651048.61UniProt (G0RYD6)
Pfam (PF16717)
Pfam (PF00226)
In PDB		Thermochaetoides thermophila DSM 1495
8DPutative heat shock proteinpolymer57862449.41UniProt (G0RZX9)
Pfam (PF00012)
In PDB		Thermochaetoides thermophila DSM 1495
9LA60S ribosomal protein L2-like proteinpolymer25427598.91UniProt (G0S4P8)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Thermochaetoides thermophila DSM 1495
10LB60S ribosomal protein L3-like proteinpolymer39244456.91UniProt (G0RXW1)
Pfam (PF00297)
In PDB		Thermochaetoides thermophila DSM 1495
11LC60S ribosomal protein L4-like proteinpolymer36539439.91UniProt (G0SFC3)
Pfam (PF00573)
Pfam (PF14374)
In PDB		Thermochaetoides thermophila DSM 1495
12LD60S ribosomal protein l5-like proteinpolymer30435034.61UniProt (G0SEG2)
Pfam (PF17144)
Pfam (PF14204)
In PDB		Thermochaetoides thermophila DSM 1495
13LE60S ribosomal protein L6polymer20022133.01UniProt (G0S0D6)
Pfam (PF01159)
In PDB		Thermochaetoides thermophila DSM 1495
14LF60S ribosomal protein l7-like proteinpolymer24928821.81UniProt (G0SFL0)
Pfam (PF08079)
Pfam (PF00327)
In PDB		Thermochaetoides thermophila DSM 1495
15LG60S ribosomal protein L8polymer26229744.51UniProt (G0SAJ9)
Pfam (PF01248)
In PDB		Thermochaetoides thermophila DSM 1495
16LHuL6polymer19221582.11Thermochaetoides thermophila DSM 1495
17LI60S ribosomal protein L10-like proteinpolymer21925255.41UniProt (G0SEI1)
Pfam (PF00252)
In PDB		Thermochaetoides thermophila DSM 1495
18LJPutative ribosomal proteinpolymer17320119.31UniProt (G0SHQ2)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Thermochaetoides thermophila DSM 1495
19LK60S ribosomal protein L12-like proteinpolymer16517802.71UniProt (G0SGH8)
Pfam (PF03946)
Pfam (PF00298)
In PDB		Thermochaetoides thermophila DSM 1495
20LL60S ribosomal protein L13polymer21324191.21UniProt (G0S992)
Pfam (PF01294)
In PDB		Thermochaetoides thermophila DSM 1495
21LM60S ribosomal protein L14-like proteinpolymer14216111.91UniProt (G0S1R0)
Pfam (PF01929)
In PDB		Thermochaetoides thermophila DSM 1495
22LNRibosomal protein L15polymer20324307.31UniProt (G0RZ88)
Pfam (PF00827)
In PDB		Thermochaetoides thermophila DSM 1495
23LO60S ribosomal protein L16-like proteinpolymer20423035.21UniProt (G0SH61)
Pfam (PF00572)
In PDB		Thermochaetoides thermophila DSM 1495
24LP60S ribosomal protein l17-like proteinpolymer18721072.21UniProt (G0SGY1)
Pfam (PF00237)
In PDB		Thermochaetoides thermophila DSM 1495
25LQRibosomal protein L18-like proteinpolymer21324195.51UniProt (G0S9B5)
Pfam (PF17135)
In PDB		Thermochaetoides thermophila DSM 1495
26LRRibosomal protein L19polymer19222409.21UniProt (G0S9T3)
Pfam (PF01280)
In PDB		Thermochaetoides thermophila DSM 1495
27LS60S ribosomal protein L20polymer17420341.91UniProt (G0SCE2)
Pfam (PF01775)
In PDB		Thermochaetoides thermophila DSM 1495
28LT60S ribosomal protein l21-like proteinpolymer16018159.21UniProt (G0S0Z3)
Pfam (PF01157)
In PDB		Thermochaetoides thermophila DSM 1495
29LU60S ribosomal protein L22-like proteinpolymer12714302.61UniProt (G0SDS8)
Pfam (PF01776)
In PDB		Thermochaetoides thermophila DSM 1495
30LV60S ribosomal protein l23-like proteinpolymer13914674.41UniProt (G0SI44)
Pfam (PF00238)
In PDB		Thermochaetoides thermophila DSM 1495
31LWeL24polymer16118081.11Thermochaetoides thermophila DSM 1495
32LX60S ribosomal protein L25-like proteinpolymer15617175.31UniProt (G0S507)
Pfam (PF03939)
Pfam (PF00276)
In PDB		Thermochaetoides thermophila DSM 1495
33LY60S ribosomal protein L26-like proteinpolymer13815565.31UniProt (G0RYN9)
Pfam (PF16906)
Pfam (PF00467)
In PDB		Thermochaetoides thermophila DSM 1495
34LZ60S ribosomal protein L27polymer13515803.71UniProt (G0RZE9)
Pfam (PF01777)
In PDB		Thermochaetoides thermophila DSM 1495
35La60S ribosomal protein L28-like proteinpolymer14916848.51Thermochaetoides thermophila DSM 1495
36Lb60S ribosomal protein L29polymer657529.71Thermochaetoides thermophila DSM 1495
37Lc60S ribosomal protein l30-like proteinpolymer10811602.61UniProt (G0SEI0)
Pfam (PF01248)
In PDB		Thermochaetoides thermophila DSM 1495
38LdPutative 60S ribosomal proteinpolymer12013872.21UniProt (G0SD68)
Pfam (PF01198)
In PDB		Thermochaetoides thermophila DSM 1495
39Le60S ribosomal protein L32-like proteinpolymer13115096.01UniProt (G0S6V4)
Pfam (PF01655)
In PDB		Thermochaetoides thermophila DSM 1495
40Lf60S ribosomal protein l33-like proteinpolymer10912330.31UniProt (G0SCL3)
Pfam (PF01247)
In PDB		Thermochaetoides thermophila DSM 1495
41LgRibosomal protein l34-like proteinpolymer11913493.01UniProt (G0SFN0)
Pfam (PF01199)
In PDB		Thermochaetoides thermophila DSM 1495
42LhDolichyl-diphosphooligosaccharide--protein glycotransferasepolymer12614643.41UniProt (G0S0D7)
Pfam (PF00831)
In PDB		Thermochaetoides thermophila DSM 1495
43Li60S ribosomal protein L36polymer11012784.11UniProt (G0SBN1)
Pfam (PF01158)
In PDB		Thermochaetoides thermophila DSM 1495
44LjRibosomal protein L37polymer9510660.51UniProt (G0S101)
Pfam (PF01907)
In PDB		Thermochaetoides thermophila DSM 1495
45LkeL38polymer819537.31Thermochaetoides thermophila DSM 1495
46LlRibosomal protein eL39polymer516297.51Thermochaetoides thermophila DSM 1495
47LmPutative ribosomal proteinpolymer12814609.21UniProt (G0S8G4)
Pfam (PF00240)
Pfam (PF01020)
In PDB		Thermochaetoides thermophila DSM 1495
48Ln, Lr60S ribosomal protein L41-Apolymer253354.22Thermochaetoides thermophila DSM 1495
49Lo60S ribosomal protein L44-like proteinpolymer10612045.51UniProt (G0SBZ6)
Pfam (PF00935)
In PDB		Thermochaetoides thermophila DSM 1495
50Lp60S ribosomal protein L43-like proteinpolymer9210159.01UniProt (G0S6B0)
Pfam (PF01780)
In PDB		Thermochaetoides thermophila DSM 1495
51LqPutative 60S ribosomal proteinpolymer14715960.51UniProt (G0SHJ6)
Pfam (PF01778)
In PDB		Thermochaetoides thermophila DSM 1495
52Ls60S acidic ribosomal protein P0polymer31233853.61UniProt (G0SGP3)
Pfam (PF00466)
Pfam (PF17777)
Pfam (PF00428)
In PDB		Thermochaetoides thermophila DSM 1495
53NCNascent chainpolymer272315.81Thermochaetoides thermophila DSM 1495
54SA40S ribosomal protein S0polymer28531159.01UniProt (G0RYF9)
Pfam (PF00318)
In PDB		Thermochaetoides thermophila DSM 1495
55SB40S ribosomal protein S1polymer25529245.21UniProt (G0S7T8)
Pfam (PF01015)
In PDB		Thermochaetoides thermophila DSM 1495
56SC40S ribosomal protein S2-like proteinpolymer26328556.11UniProt (G0SAV4)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Thermochaetoides thermophila DSM 1495
57SD40S ribosomal protein S3-like proteinpolymer25427893.01UniProt (G0S6I7)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Thermochaetoides thermophila DSM 1495
58SE40S ribosomal protein S4polymer26429800.81UniProt (G0S1A6)
Pfam (PF08071)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
In PDB		Thermochaetoides thermophila DSM 1495
59SF40S ribosomal protein s5-like proteinpolymer21223679.21UniProt (G0S1Z0)
Pfam (PF00177)
In PDB		Thermochaetoides thermophila DSM 1495
60SG40S ribosomal protein S6polymer23927490.11UniProt (G0RY43)
Pfam (PF01092)
In PDB		Thermochaetoides thermophila DSM 1495
61SH40S ribosomal protein S7polymer20323084.71UniProt (G0S8C4)
Pfam (PF01251)
In PDB		Thermochaetoides thermophila DSM 1495
62SI40S ribosomal protein S8polymer20223102.41UniProt (G0RY45)
Pfam (PF01201)
In PDB		Thermochaetoides thermophila DSM 1495
63SJ40S ribosomal protein s9-like proteinpolymer19022029.81UniProt (G0S0Z4)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Thermochaetoides thermophila DSM 1495
64SK40S ribosomal protein s10-like proteinpolymer15918121.51UniProt (G0RZD8)
Pfam (PF03501)
In PDB		Thermochaetoides thermophila DSM 1495
65SL40S ribosomal protein S11-like proteinpolymer16118698.21UniProt (G0SF00)
Pfam (PF16205)
Pfam (PF00366)
In PDB		Thermochaetoides thermophila DSM 1495
66SM40S ribosomal protein S12polymer14415961.31UniProt (G0SHH9)
Pfam (PF01248)
In PDB		Thermochaetoides thermophila DSM 1495
67SN40S ribosomal protein S13-like proteinpolymer15116912.91UniProt (G0RZM9)
Pfam (PF08069)
Pfam (PF00312)
In PDB		Thermochaetoides thermophila DSM 1495
68SO40S ribosomal protein S14-like proteinpolymer15016071.51UniProt (G0SFL1)
Pfam (PF00411)
In PDB		Thermochaetoides thermophila DSM 1495
69SP40S ribosomal protein s15-like proteinpolymer15317601.61UniProt (G0S084)
Pfam (PF00203)
In PDB		Thermochaetoides thermophila DSM 1495
70SQ40S ribosomal protein S16-like proteinpolymer14315962.81UniProt (G0SBR7)
Pfam (PF00380)
In PDB		Thermochaetoides thermophila DSM 1495
71SR40S ribosomal protein S17-like proteinpolymer14316720.21UniProt (G0S871)
Pfam (PF00833)
In PDB		Thermochaetoides thermophila DSM 1495
72SSPutative ribosomal proteinpolymer15617826.71UniProt (G0S6J7)
Pfam (PF00416)
In PDB		Thermochaetoides thermophila DSM 1495
73ST40S ribosomal protein S19-like proteinpolymer15317151.31UniProt (G0SFK8)
Pfam (PF01090)
In PDB		Thermochaetoides thermophila DSM 1495
74SU40S ribosomal protein S20-like proteinpolymer11613212.61UniProt (G0S379)
Pfam (PF00338)
In PDB		Thermochaetoides thermophila DSM 1495
75SV40S ribosomal protein S21-like proteinpolymer9810961.51UniProt (G0SI21)
Pfam (PF01249)
In PDB		Thermochaetoides thermophila DSM 1495
76SW40S ribosomal protein S22-like proteinpolymer13014905.51UniProt (G0SHI0)
Pfam (PF00410)
In PDB		Thermochaetoides thermophila DSM 1495
77SX40S ribosomal protein s23-like proteinpolymer14515934.71UniProt (G0RY17)
Pfam (PF00164)
In PDB		Thermochaetoides thermophila DSM 1495
78SY40S ribosomal protein S24polymer13615535.31UniProt (P0CU28)
Pfam (PF01282)
In PDB		Thermochaetoides thermophila DSM 1495
79SZ40S ribosomal protein S25polymer9910932.91UniProt (G0S1Y9)
Pfam (PF03297)
In PDB		Thermochaetoides thermophila DSM 1495
80Sa40S ribosomal protein S26polymer11913616.21UniProt (G0S2X4)
Pfam (PF01283)
In PDB		Thermochaetoides thermophila DSM 1495
81SbRibosomal protein s27-like proteinpolymer828923.61UniProt (G0S1S4)
Pfam (PF01667)
In PDB		Thermochaetoides thermophila DSM 1495
82Sc40S ribosomal protein S28-like proteinpolymer687742.01UniProt (G0S9M9)
Pfam (PF01200)
In PDB		Thermochaetoides thermophila DSM 1495
83SdRibosomal protein uS14polymer566504.61Thermochaetoides thermophila DSM 1495
84Se40S ribosomal protein S30polymer626910.31Thermochaetoides thermophila DSM 1495
85Sf40S ribosomal protein S27a-like proteinpolymer15417731.81UniProt (G0S2X5)
Pfam (PF00240)
Pfam (PF01599)
In PDB		Thermochaetoides thermophila DSM 1495
861, 2, 4, D, LC...MAGNESIUM IONnon-polymer24.3472Chemie (MG)
87DADENOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (ATP)
88Lg, Lj, Lm, Lo, Lp...ZINC IONnon-polymer65.48Chemie (ZN)
Sequence modifications
Lm: 1 - 128 (UniProt: G0S8G4)
PDBExternal DatabaseDetails
Met 1Ser 593conflict
Gln 2Arg 594conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains86
Total formula weight3349304.0
Non-Polymers*Number of molecules481
Total formula weight12502.4
All*Total formula weight3361806.4
*Water molecules are not included.

218853

PDB entries from 2024-04-24

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