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7YFL

Structure of GluN1a-GluN2D NMDA receptor in complex with agonists glycine and glutamate.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, CGlutamate receptor ionotropic, NMDA 1polymer84795236.12UniProt (Q05586)
Pfam (PF01094)
Pfam (PF10613)
Pfam (PF00060)
Pfam (PF00497)
In PDB
Homo sapiens (human)GluN1,Glutamate [NMDA] receptor subunit zeta-1,N-methyl-D-aspartate receptor subunit NR1,NMD-R1
2B, DGlutamate receptor ionotropic, NMDA 2Dpolymer89197226.42UniProt (O15399)
Pfam (PF01094)
Pfam (PF10613)
Pfam (PF00060)
Pfam (PF00497)
In PDB
Homo sapiens (human)GluN2D,EB11,Glutamate [NMDA] receptor subunit epsilon-4,N-methyl D-aspartate receptor subtype 2D,NMDAR2D,NR2D
3E, F, G, H2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.44In PDB
GlyTouCan (G42666HT)
4A, CGLYCINEnon-polymer75.12Chemie (GLY)
5A, C2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.210Chemie (NAG)
6B, DGLUTAMIC ACIDnon-polymer147.12Chemie (GLU)
Sequence modifications
B, D: 1 - 879 (UniProt: O15399)
PDBExternal DatabaseDetails
Ala 880-expression tag
Ala 881-expression tag
Ser 882-expression tag
Ala 883-expression tag
Trp 884-expression tag
Ser 885-expression tag
His 886-expression tag
Pro 887-expression tag
Gln 888-expression tag
Phe 889-expression tag
Glu 890-expression tag
Lys 891-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight384925.0
BranchedNumber of molecules4
Total formula weight1697.6
Non-Polymers*Number of molecules14
Total formula weight2656.5
All*Total formula weight389279.1
*Water molecules are not included.

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PDB entries from 2024-06-12

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