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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

7WTZ

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B2

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1218S rRNApolymer1873604102.81Homo sapiens
2F40S ribosomal protein S5polymer20422913.51UniProt (P46782)
Pfam (PF00177)
In PDB		Homo sapiens (human)Small ribosomal subunit protein uS7
3M40S ribosomal protein S12polymer13214539.01UniProt (P25398)
Pfam (PF01248)
In PDB		Homo sapiens (human)Small ribosomal subunit protein eS12
4P40S ribosomal protein S15polymer14517076.21UniProt (P62841)
Pfam (PF00203)
In PDB		Homo sapiens (human)RIG protein,Small ribosomal subunit protein uS19
5Q40S ribosomal protein S16polymer14616477.41UniProt (P62249)
Pfam (PF00380)
In PDB		Homo sapiens (human)Small ribosomal subunit protein uS9
6R40S ribosomal protein S17polymer13515578.21UniProt (P08708)
Pfam (PF00833)
In PDB		Homo sapiens (human)Small ribosomal subunit protein eS17
7S40S ribosomal protein S18polymer15217759.81UniProt (P62269)
Pfam (PF00416)
In PDB		Homo sapiens (human)Ke-3,Ke3,Small ribosomal subunit protein uS13
8T40S ribosomal protein S19polymer14516091.61UniProt (P39019)
Pfam (PF01090)
In PDB		Homo sapiens (human)Small ribosomal subunit protein eS19
9Z40S ribosomal protein S25polymer12513776.21UniProt (P62851)
Pfam (PF03297)
In PDB		Homo sapiens (human)Small ribosomal subunit protein eS25
10c40S ribosomal protein S28polymer697855.11UniProt (P62857)
Pfam (PF01200)
In PDB		Homo sapiens (human)Small ribosomal subunit protein eS28
11fUbiquitin-40S ribosomal protein S27apolymer15618004.01UniProt (P62979)
Pfam (PF00240)
Pfam (PF01599)
In PDB		Homo sapiens (human)Ubiquitin carboxyl extension protein 80
12A40S ribosomal protein SApolymer29532883.91UniProt (P08865)
Pfam (PF00318)
Pfam (PF16122)
In PDB		Homo sapiens (human)37 kDa laminin receptor precursor,37LRP,37/67 kDa laminin receptor,LRP/LR,67 kDa laminin receptor,67LR,Colon carcinoma laminin-binding protein,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40,Multidrug resistance-associated protein MGr1-Ag,NEM/1CHD4,Small ribosomal subunit protein uS2
13B40S ribosomal protein S3apolymer26430002.11UniProt (P61247)
Pfam (PF01015)
In PDB		Homo sapiens (human)Small ribosomal subunit protein eS1,v-fos transformation effector protein,Fte-1
14C40S ribosomal protein S2polymer29331376.51UniProt (P15880)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Homo sapiens (human)40S ribosomal protein S4,Protein LLRep3,Small ribosomal subunit protein uS5
15E40S ribosomal protein S4, X isoformpolymer26329654.91UniProt (P62701)
Pfam (PF16121)
Pfam (PF08071)
Pfam (PF00900)
Pfam (PF00467)
In PDB		Homo sapiens (human)SCR10,Single copy abundant mRNA protein,Small ribosomal subunit protein eS4
16G40S ribosomal protein S6polymer24928751.91UniProt (P62753)
Pfam (PF01092)
In PDB		Homo sapiens (human)Phosphoprotein NP33,Small ribosomal subunit protein eS6
17H40S ribosomal protein S7polymer19422168.91UniProt (P62081)
Pfam (PF01251)
In PDB		Homo sapiens (human)Small ribosomal subunit protein eS7
18I40S ribosomal protein S8polymer20824263.41UniProt (P62241)
Pfam (PF01201)
In PDB		Homo sapiens (human)Small ribosomal subunit protein eS8
19J40S ribosomal protein S9polymer19422641.61UniProt (P46781)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Homo sapiens (human)Small ribosomal subunit protein uS4
20L40S ribosomal protein S11polymer15818468.81UniProt (P62280)
Pfam (PF16205)
Pfam (PF00366)
In PDB		Homo sapiens (human)Small ribosomal subunit protein uS17
21N40S ribosomal protein S13polymer15117259.41UniProt (P62277)
Pfam (PF08069)
Pfam (PF00312)
In PDB		Homo sapiens (human)Small ribosomal subunit protein uS15
22O40S ribosomal protein S14polymer15116302.81UniProt (P62263)
Pfam (PF00411)
In PDB		Homo sapiens (human)Small ribosomal subunit protein uS11
23V40S ribosomal protein S21polymer839124.41UniProt (P63220)
Pfam (PF01249)
In PDB		Homo sapiens (human)Small ribosomal subunit protein eS21
24W40S ribosomal protein S15apolymer13014865.61UniProt (P62244)
Pfam (PF00410)
In PDB		Homo sapiens (human)Small ribosomal subunit protein uS8
25X40S ribosomal protein S23polymer14315844.71UniProt (P62266)
Pfam (PF00164)
In PDB		Homo sapiens (human)Small ribosomal subunit protein uS12
26Y40S ribosomal protein S24polymer13315463.31UniProt (P62847)
Pfam (PF01282)
In PDB		Homo sapiens (human)Small ribosomal subunit protein eS24
27b40S ribosomal protein S27polymer849480.21UniProt (P42677)
Pfam (PF01667)
In PDB		Homo sapiens (human)Metallopan-stimulin 1,MPS-1,Small ribosomal subunit protein eS27
28e40S ribosomal protein S30polymer596668.91UniProt (P62861)
Pfam (PF04758)
In PDB		Homo sapiens (human)Small ribosomal subunit protein eS30
29xRNA-binding protein PNO1polymer25227970.41UniProt (Q9NRX1)
In PDB		Homo sapiens (human)Partner of NOB1
30yRNA-binding protein NOB1polymer41246743.91UniProt (Q9ULX3)
Pfam (PF17146)
Pfam (PF15017)
Pfam (PF08772)
In PDB		Homo sapiens (human)Phosphorylation regulatory protein HP-10,Protein ART-4
31uPre-rRNA-processing protein TSR1 homologpolymer80491951.21UniProt (Q2NL82)
Pfam (PF08142)
Pfam (PF04950)
In PDB		Homo sapiens (human)
32wBystinpolymer43749673.31UniProt (Q13895)
Pfam (PF05291)
In PDB		Homo sapiens (human)
33tProtein LTV1 homologpolymer47554935.91UniProt (Q96GA3)
Pfam (PF04180)
In PDB		Homo sapiens (human)
34KRRP12-like proteinpolymer1297143916.51UniProt (Q5JTH9)
Pfam (PF08161)
In PDB		Homo sapiens (human)
35f, yZINC IONnon-polymer65.42Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains34
Total formula weight1524585.9
Non-Polymers*Number of molecules2
Total formula weight130.8
All*Total formula weight1524716.7
*Water molecules are not included.

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PDB entries from 2024-06-12

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