7U56
Crystal Structure of D-alanine--D-alanine ligase from Klebsiella pneumoniae subsp. pneumoniae in complex with AMP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | D-alanine--D-alanine ligase | polymer | 384 | 41893.8 | 2 | UniProt (A0A0H3GSI5) Pfam (PF01820) Pfam (PF07478) In PDB | Klebsiella pneumoniae subsp. pneumoniae HS11286 | D-Ala-D-Ala ligase,D-alanylalanine synthetase |
2 | A, B | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 2 | Chemie (AMP) | |||
3 | A, B | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
4 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 8 | Chemie (EDO) | |||
5 | A, B | CHLORIDE ION | non-polymer | 35.5 | 4 | Chemie (CL) | |||
6 | water | water | 18.0 | 754 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 376 (UniProt: A0A0H3GSI5)
PDB | External Database | Details |
---|---|---|
Met -7 | - | initiating methionine |
Ala -6 | - | expression tag |
His -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 83787.5 | |
Non-Polymers* | Number of molecules | 16 |
Total formula weight | 1381.4 | |
All* | Total formula weight | 85168.9 |