7SSL

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	3	16S rRNA	polymer	1539	498725.4	1	GenBank (1126835768)	Escherichia coli K-12
2	1	23S rRNA	polymer	2903	941305.3	1	GenBank (802133627)	Escherichia coli K-12
3	2	5S rRNA	polymer	120	38813.1	1	GenBank (1266961702)	Escherichia coli K-12
4	5	tRNA Pro	polymer	77	24862.7	1	GenBank (1848949880)	Escherichia coli K-12
5	8	Elongation factor G	polymer	697	76902.2	1	UniProt (U9XYS4) In PDB	Escherichia coli 113303	EF-G
6	b	50S ribosomal protein L2	polymer	271	29663.2	1	UniProt (P60422) Pfam (PF00181) Pfam (PF03947) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL2
7	c	50S ribosomal protein L3	polymer	209	22277.5	1	UniProt (P60438) Pfam (PF00297) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL3
8	d	50S ribosomal protein L4	polymer	201	22121.6	1	UniProt (P60723) Pfam (PF00573) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL4
9	e	50S ribosomal protein L5	polymer	177	20073.2	1	UniProt (P62399) Pfam (PF00281) Pfam (PF00673) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL5
10	f	50S ribosomal protein L6	polymer	176	18801.6	1	UniProt (P0AG55) Pfam (PF00347) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL6
11	g	50S ribosomal protein L9	polymer	149	15789.0	1	UniProt (P0A7R1) Pfam (PF01281) Pfam (PF03948) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL9
12	a	50S ribosomal protein L1	polymer	223	23735.5	1	UniProt (P0A7L0) Pfam (PF00687) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL1
13	i	50S ribosomal protein L11	polymer	141	14763.2	1	UniProt (P0A7J7) Pfam (PF03946) Pfam (PF00298) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL11
14	j	50S ribosomal protein L13	polymer	142	16050.6	1	UniProt (P0AA10) Pfam (PF00572) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL13
15	k	50S ribosomal protein L14	polymer	122	13451.9	1	UniProt (P0ADY3) Pfam (PF00238) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL14
16	l	50S ribosomal protein L15	polymer	143	14877.3	1	UniProt (P02413) Pfam (PF00828) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL15
17	m	50S ribosomal protein L16	polymer	136	15312.3	1	UniProt (P0ADY7) Pfam (PF00252) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL16
18	n	50S ribosomal protein L17	polymer	120	13721.9	1	UniProt (P0AG44) Pfam (PF01196) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL17
19	o	50S ribosomal protein L18	polymer	116	12663.5	1	UniProt (P0C018) Pfam (PF00861) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL18
20	p	50S ribosomal protein L19	polymer	114	13028.1	1	UniProt (P0A7K6) Pfam (PF01245) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL19
21	q	50S ribosomal protein L20	polymer	117	13396.8	1	UniProt (P0A7L3) Pfam (PF00453) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL20
22	r	50S ribosomal protein L21	polymer	103	11586.4	1	UniProt (P0AG48) Pfam (PF00829) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL21
23	s	50S ribosomal protein L22	polymer	110	12253.4	1	UniProt (P61175) Pfam (PF00237) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL22
24	t	50S ribosomal protein L23	polymer	93	10546.5	1	UniProt (P0ADZ0) Pfam (PF00276) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL23
25	u	50S ribosomal protein L24	polymer	102	11078.9	1	UniProt (P60624) Pfam (PF00467) Pfam (PF17136) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL24
26	v	50S ribosomal protein L25	polymer	94	10713.5	1	UniProt (P68919) Pfam (PF01386) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL25
27	w	50S ribosomal protein L27	polymer	75	8174.4	1	UniProt (P0A7L8) Pfam (PF01016) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL27
28	x	50S ribosomal protein L28	polymer	77	8896.4	1	UniProt (P0A7M2) Pfam (PF00830) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL28
29	y	50S ribosomal protein L29	polymer	63	7286.5	1	UniProt (P0A7M6) Pfam (PF00831) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL29
30	z	50S ribosomal protein L30	polymer	58	6423.6	1	UniProt (P0AG51) Pfam (PF00327) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL30
31	A	50S ribosomal protein L31	polymer	66	7516.7	1	UniProt (P0A7M9) Pfam (PF01197) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL31-A
32	B	50S ribosomal protein L32	polymer	56	6332.2	1	UniProt (P0A7N4) Pfam (PF01783) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL32
33	C	50S ribosomal protein L33	polymer	50	5814.8	1	UniProt (P0A7N9) Pfam (PF00471) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL33
34	D	50S ribosomal protein L34	polymer	46	5397.5	1	UniProt (P0A7P5) Pfam (PF00468) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL34
35	E	50S ribosomal protein L35	polymer	64	7181.8	1	UniProt (P0A7Q1) Pfam (PF01632) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL35,Ribosomal protein A
36	F	50S ribosomal protein L36	polymer	38	4377.4	1	UniProt (P0A7Q6) Pfam (PF00444) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL36-A,Ribosomal protein B
37	4	mRNA	polymer	35	11386.0	1		Escherichia coli K-12
38	6	tRNA fMet	polymer	77	24802.8	1	GenBank (1275521620)	Escherichia coli K-12
39	G	30S ribosomal protein S2	polymer	225	25015.8	1	UniProt (P0A7V0) Pfam (PF00318) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS2
40	H	30S ribosomal protein S3	polymer	206	23078.8	1	UniProt (P0A7V3) Pfam (PF07650) Pfam (PF00189) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS3
41	I	30S ribosomal protein S4	polymer	205	23383.0	1	UniProt (P0A7V8) Pfam (PF00163) Pfam (PF01479) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS4
42	J	30S ribosomal protein S5	polymer	157	16532.1	1	UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS5
43	K	30S ribosomal protein S6	polymer	100	11669.4	1	UniProt (P02358) Pfam (PF01250) In PDB	Escherichia coli K-12	Small ribosomal subunit protein bS6
44	L	30S ribosomal protein S7	polymer	151	16861.5	1	UniProt (P02359) Pfam (PF00177) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS7
45	M	30S ribosomal protein S8	polymer	129	14015.4	1	UniProt (P0A7W7) Pfam (PF00410) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS8
46	N	30S ribosomal protein S9	polymer	127	14554.9	1	UniProt (P0A7X3) Pfam (PF00380) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS9
47	O	30S ribosomal protein S10	polymer	98	11197.0	1	UniProt (P0A7R5) Pfam (PF00338) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS10
48	P	30S ribosomal protein S11	polymer	116	12388.1	1	UniProt (P0A7R9) Pfam (PF00411) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS11
49	Q	30S ribosomal protein S12	polymer	123	13637.0	1	UniProt (P0A7S3) Pfam (PF00164) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS12
50	R	30S ribosomal protein S13	polymer	114	12625.8	1	UniProt (P0A7S9) Pfam (PF00416) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS13
51	S	30S ribosomal protein S14	polymer	100	11475.4	1	UniProt (P0AG59) Pfam (PF00253) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS14
52	T	30S ribosomal protein S15	polymer	88	10159.6	1	UniProt (P0ADZ4) Pfam (PF00312) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS15
53	U	30S ribosomal protein S16	polymer	82	9207.6	1	UniProt (P0A7T3) Pfam (PF00886) In PDB	Escherichia coli K-12	Small ribosomal subunit protein bS16
54	V	30S ribosomal protein S17	polymer	80	9263.9	1	UniProt (P0AG63) Pfam (PF00366) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS17
55	W	30S ribosomal protein S18	polymer	65	7606.8	1	UniProt (P0A7T7) Pfam (PF01084) In PDB	Escherichia coli K-12	Small ribosomal subunit protein bS18
56	X	30S ribosomal protein S19	polymer	79	9057.6	1	UniProt (P0A7U3) Pfam (PF00203) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS19
57	Y	30S ribosomal protein S20	polymer	85	9506.2	1	UniProt (P0A7U7) Pfam (PF01649) In PDB	Escherichia coli K-12	Small ribosomal subunit protein bS20
58	Z	30S ribosomal protein S21	polymer	65	7763.1	1	UniProt (P68679) Pfam (PF01165) In PDB	Escherichia coli K-12	Small ribosomal subunit protein bS21
59	8	GUANOSINE-5'-DIPHOSPHATE	non-polymer		443.2	1	Chemie (GDP)
60	8	PHOSPHATE ION	non-polymer		95.0	1	Chemie (PO4)

Sequence modifications

1: 1 - 2903 (GenBank: 802133627)

PDB	External Database	Details
C 747	U 2724742	conflict

2: 1 - 119 (GenBank: 1266961702)

PDB	External Database	Details
A 120	-	insertion

Contents of the asymmetric unit

Polymers	Number of chains	58
	Total formula weight	2289103.4
Non-Polymers*	Number of molecules	2
	Total formula weight	538.2
All*	Total formula weight	2289641.6

*Water molecules are not included.