Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | 1 | 50S ribosomal protein L33 | polymer | 49 | 5944.9 | 1 | UniProt (A0A077V2P0) Pfam (PF00471) In PDB | Staphylococcus aureus | |
2 | 2 | 50S ribosomal protein L34 | polymer | 45 | 5454.6 | 1 | UniProt (A0A0D1JMX2) Pfam (PF00468) In PDB | Staphylococcus aureus | |
3 | 3 | 50S ribosomal protein L35 | polymer | 66 | 7722.4 | 1 | UniProt (A0A077UL47) Pfam (PF01632) In PDB | Staphylococcus aureus | |
4 | 4 | 50S ribosomal protein L36 | polymer | 37 | 4318.4 | 1 | UniProt (A0A077UGV8) Pfam (PF00444) In PDB | Staphylococcus aureus | |
5 | 5 | P-site tRNA | polymer | 73 | 23544.0 | 1 | Staphylococcus aureus | ||
6 | 6 | ABC-F type ribosomal protection protein | polymer | 565 | 66070.6 | 1 | UniProt (A0A7D7YNB9) In PDB | Staphylococcus lentus | |
7 | 7 | mRNA | polymer | 3 | 935.6 | 1 | Staphylococcus aureus | ||
8 | A | 23S rRNA | polymer | 2921 | 946022.2 | 1 | Staphylococcus aureus | ||
9 | B | 5S rRNA | polymer | 115 | 36974.9 | 1 | GenBank (1434110260) | Staphylococcus aureus | |
10 | C | 50S ribosomal protein L2 | polymer | 276 | 30088.0 | 1 | UniProt (B3VKN3) Pfam (PF00181) Pfam (PF03947) In PDB | Staphylococcus aureus | |
11 | D | 50S ribosomal protein L3 | polymer | 220 | 23760.3 | 1 | UniProt (W8U3W0) Pfam (PF00297) In PDB | Staphylococcus aureus | |
12 | E | 50S ribosomal protein L4 | polymer | 207 | 22495.7 | 1 | UniProt (W8TRC7) Pfam (PF00573) In PDB | Staphylococcus aureus | |
13 | F | 50S ribosomal protein L5 | polymer | 179 | 20296.6 | 1 | UniProt (W8TUC3) Pfam (PF00673) Pfam (PF00281) In PDB | Staphylococcus aureus | |
14 | G | 50S ribosomal protein L6 | polymer | 178 | 19818.6 | 1 | UniProt (W8U3X2) Pfam (PF00347) In PDB | Staphylococcus aureus | |
15 | H | 50S ribosomal protein L13 | polymer | 145 | 16359.4 | 1 | UniProt (W8TUE6) Pfam (PF00572) In PDB | Staphylococcus aureus | |
16 | I | 50S ribosomal protein L14 | polymer | 122 | 13157.3 | 1 | UniProt (A0A077UUA0) Pfam (PF00238) In PDB | Staphylococcus aureus | |
17 | J | 50S ribosomal protein L15 | polymer | 146 | 15628.9 | 1 | UniProt (A0A077UGA7) Pfam (PF00828) In PDB | Staphylococcus aureus | |
18 | K | 50S ribosomal protein L16 | polymer | 144 | 16274.0 | 1 | UniProt (A0A077V4G0) Pfam (PF00252) In PDB | Staphylococcus aureus | |
19 | L | 50S ribosomal protein L17 | polymer | 122 | 13771.8 | 1 | UniProt (A0A077UG91) Pfam (PF01196) In PDB | Staphylococcus aureus | |
20 | M | 50S ribosomal protein L18 | polymer | 119 | 13124.1 | 1 | UniProt (W8TRE0) Pfam (PF00861) In PDB | Staphylococcus aureus | |
21 | N | 50S ribosomal protein L19 | polymer | 116 | 13392.8 | 1 | UniProt (A0A077UVB6) Pfam (PF01245) In PDB | Staphylococcus aureus | |
22 | O | 50S ribosomal protein L20 | polymer | 118 | 13720.3 | 1 | UniProt (A0A077VMP6) Pfam (PF00453) In PDB | Staphylococcus aureus | |
23 | P | 50S ribosomal protein L21 | polymer | 102 | 11354.1 | 1 | UniProt (D7URR3) Pfam (PF00829) In PDB | Staphylococcus aureus | |
24 | Q | 50S ribosomal protein L22 | polymer | 117 | 12857.9 | 1 | UniProt (A0A077UKF9) Pfam (PF00237) In PDB | Staphylococcus aureus | |
25 | R | 50S ribosomal protein L23 | polymer | 91 | 10625.4 | 1 | UniProt (W8TUB4) Pfam (PF00276) In PDB | Staphylococcus aureus | |
26 | S | 50S ribosomal protein L24 | polymer | 105 | 11561.5 | 1 | UniProt (W8TRD5) Pfam (PF00467) Pfam (PF17136) In PDB | Staphylococcus aureus | |
27 | T | 50S ribosomal protein L25 | polymer | 219 | 24099.0 | 1 | UniProt (A0A133Q8Z9) Pfam (PF01386) Pfam (PF14693) In PDB | Staphylococcus aureus | General stress protein CTC |
28 | U | LSU ribosomal protein L27P | polymer | 94 | 10334.8 | 1 | UniProt (A0A7R6NZR0) In PDB | Staphylococcus aureus | |
29 | V | 50S ribosomal protein L28 | polymer | 62 | 6995.3 | 1 | UniProt (A0A077URJ8) Pfam (PF00830) In PDB | Staphylococcus aureus | |
30 | W | 50S ribosomal protein L29 | polymer | 69 | 8105.3 | 1 | UniProt (A0A0D1IHY2) Pfam (PF00831) In PDB | Staphylococcus aureus | |
31 | X | 50S ribosomal protein L30 | polymer | 59 | 6565.7 | 1 | UniProt (W8UVN7) Pfam (PF00327) In PDB | Staphylococcus aureus | |
32 | Y | 50S ribosomal protein L31 type B | polymer | 125 | 14311.2 | 1 | UniProt (A0A380EL30) Pfam (PF01197) In PDB | Staphylococcus aureus | |
33 | Z | 50S ribosomal protein L32 | polymer | 57 | 6544.7 | 1 | UniProt (A0A1Q8DAT0) In PDB | Staphylococcus aureus | |
34 | a | 16S rRNA | polymer | 1548 | 500724.6 | 1 | Staphylococcus aureus | ||
35 | b | 30S ribosomal protein S2 | polymer | 232 | 26588.0 | 1 | UniProt (A0A2X2M020) Pfam (PF00318) In PDB | Staphylococcus aureus | |
36 | c | 30S ribosomal protein S3 | polymer | 217 | 24143.9 | 1 | UniProt (A0A077UU26) Pfam (PF07650) Pfam (PF00189) In PDB | Staphylococcus aureus | |
37 | d | 30S ribosomal protein S4 | polymer | 200 | 23051.4 | 1 | UniProt (W8TVK2) Pfam (PF00163) Pfam (PF01479) In PDB | Staphylococcus aureus | |
38 | e | 30S ribosomal protein S5 | polymer | 166 | 17770.5 | 1 | UniProt (W8TUC9) Pfam (PF00333) Pfam (PF03719) In PDB | Staphylococcus aureus | |
39 | f | 30S ribosomal protein S6 | polymer | 98 | 11613.1 | 1 | UniProt (W8TPC6) Pfam (PF01250) In PDB | Staphylococcus aureus | |
40 | g | 30S ribosomal protein S7 | polymer | 156 | 17826.6 | 1 | UniProt (A0A077VHU6) Pfam (PF00177) In PDB | Staphylococcus aureus | |
41 | h | 30S ribosomal protein S8 | polymer | 132 | 14854.3 | 1 | UniProt (W8U8T8) Pfam (PF00410) In PDB | Staphylococcus aureus | |
42 | i | 30S ribosomal protein S9 | polymer | 130 | 14642.7 | 1 | UniProt (A0A1Q4GY48) Pfam (PF00380) In PDB | Staphylococcus aureus | |
43 | j | 30S ribosomal protein S10 | polymer | 102 | 11598.5 | 1 | UniProt (A0A0H2K0A0) Pfam (PF00338) In PDB | Staphylococcus aureus | |
44 | k | 30S ribosomal protein S11 | polymer | 129 | 13908.0 | 1 | UniProt (A0A077UKD6) Pfam (PF00411) In PDB | Staphylococcus aureus | |
45 | l | 30S ribosomal protein S12 | polymer | 149 | 16813.6 | 1 | UniProt (A0A133PZQ5) Pfam (PF00164) In PDB | Staphylococcus aureus | |
46 | m | 30S ribosomal protein S13 | polymer | 121 | 13747.9 | 1 | UniProt (W8U8U6) Pfam (PF00416) In PDB | Staphylococcus aureus | |
47 | n | 30S ribosomal protein S14 type Z | polymer | 61 | 7317.8 | 1 | UniProt (A0A077UGW7) Pfam (PF00253) In PDB | Staphylococcus aureus | |
48 | o | 30S ribosomal protein S15 | polymer | 89 | 10634.3 | 1 | UniProt (W8U6H8) Pfam (PF00312) In PDB | Staphylococcus aureus | |
49 | p | 30S ribosomal protein S16 | polymer | 91 | 10253.9 | 1 | UniProt (W8U6K4) Pfam (PF00886) In PDB | Staphylococcus aureus | |
50 | q | 30S ribosomal protein S17 | polymer | 87 | 10196.9 | 1 | UniProt (A0A077VLD5) Pfam (PF00366) In PDB | Staphylococcus aureus | |
51 | r | 30S ribosomal protein S18 | polymer | 80 | 9332.0 | 1 | UniProt (A0A077UZF4) Pfam (PF01084) In PDB | Staphylococcus aureus | |
52 | s | 30S ribosomal protein S19 | polymer | 108 | 12319.3 | 1 | UniProt (A0A133PYC3) Pfam (PF00203) In PDB | Staphylococcus aureus | |
53 | t | 30S ribosomal protein S20 | polymer | 83 | 9039.5 | 1 | UniProt (W8UXC3) Pfam (PF01649) In PDB | Staphylococcus aureus | |
54 | 4, Z, n | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
55 | 6 | ADENOSINE-5'-TRIPHOSPHATE | non-polymer | 507.2 | 2 | Chemie (ATP) | |||
56 | 6 | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) |
Sequence modifications
6: 1 - 541 (UniProt: A0A7D7YNB9)
PDB | External Database | Details |
---|---|---|
Leu 33 | Ile 33 | conflict |
Ile 39 | Val 39 | conflict |
His 66 | Tyr 66 | conflict |
Glu 84 | Gly 84 | conflict |
Gln 156 | Glu 156 | conflict |
Arg 253 | Ser 253 | conflict |
Met 406 | Thr 406 | conflict |
Gln 456 | Glu 456 | conflict |
Ser 464 | Gly 464 | conflict |
Ala 518 | Thr 518 | conflict |
Gly 542 | - | expression tag |
Gly 543 | - | expression tag |
Asp 544 | - | expression tag |
Tyr 545 | - | expression tag |
Lys 546 | - | expression tag |
Asp 547 | - | expression tag |
His 548 | - | expression tag |
Asp 549 | - | expression tag |
Gly 550 | - | expression tag |
Asp 551 | - | expression tag |
Tyr 552 | - | expression tag |
Lys 553 | - | expression tag |
Asp 554 | - | expression tag |
His 555 | - | expression tag |
Asp 556 | - | expression tag |
Ile 557 | - | expression tag |
Asp 558 | - | expression tag |
Tyr 559 | - | expression tag |
Lys 560 | - | expression tag |
Asp 561 | - | expression tag |
Asp 562 | - | expression tag |
Asp 563 | - | expression tag |
Asp 564 | - | expression tag |
Lys 565 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 53 |
Total formula weight | 2228607.1 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 1259.2 | |
All* | Total formula weight | 2229866.3 |