7NKT
RBD domain of SARS-CoV2 in complex with neutralizing nanobody NM1226
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | AAA | Spike protein S1 | polymer | 229 | 25951.2 | 1 | UniProt (P0DTC2) Pfam (PF09408) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2) | |
2 | BBB | neutralizing nanobody NM1226 | polymer | 144 | 15960.7 | 1 | Vicugna pacos | ||
3 | AAA | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
4 | AAA | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
5 | BBB | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 3 | Chemie (PEG) | |||
6 | water | water | 18.0 | 137 | Chemie (HOH) |
Sequence modifications
AAA: 319 - 541 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
His 542 | - | expression tag |
His 543 | - | expression tag |
His 544 | - | expression tag |
His 545 | - | expression tag |
His 546 | - | expression tag |
His 547 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 41911.9 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 634.5 | |
All* | Total formula weight | 42546.4 |