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7MEM

CryoEM structure of monoclonal Fab 045-09 2B05 binding the lateral patch of influenza virus H1 HA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1E, C, FHemagglutinin HA1 chainpolymer33136729.43UniProt (C3W5S1)
Pfam (PF00509)
In PDB
Influenza A virus (strain swl A/California/04/2009 H1N1)
2L, J, KLight chain of monoclonal antibody 045-09 2B05polymer10711769.13Homo sapiens
3H, G, IHeavy chain of monoclonal antibody 045-09 2B05polymer12012805.23Homo sapiens
4D, A, BHemagglutinin HA2 chainpolymer17419905.03UniProt (C3W5S1)
Pfam (PF00509)
In PDB
Influenza A virus (strain swl A/California/04/2009 H1N1)
5M, O, Qalpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched367.33In PDB
GlyTouCan (G86851RC)
6N, P, R2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.43In PDB
GlyTouCan (G42666HT)
7E, C, F2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.26Chemie (NAG)
Sequence modifications
E, C, F: 11 - 329 (UniProt: C3W5S1)
PDBExternal DatabaseDetails
Ala 7-expression tag
Asp 8-expression tag
Pro 9-expression tag
Gly 10-expression tag
D, A, B: 1 - 174 (UniProt: C3W5S1)
PDBExternal DatabaseDetails
Gly 47Glu 391engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight243626.3
BranchedNumber of molecules6
Total formula weight2375.3
Non-Polymers*Number of molecules6
Total formula weight1327.2
All*Total formula weight247328.8
*Water molecules are not included.

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PDB entries from 2024-05-15

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