6YMQ
TREM2 extracellular domain (19-131) in complex with single-chain variable 4 (scFv-4)
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... | Single-chain variable 4 | polymer | 245 | 26245.0 | 6 | Homo sapiens (Human) | ||
2 | G, H, I, J, K... | Triggering receptor expressed on myeloid cells 2 | polymer | 125 | 14067.8 | 6 | UniProt (Q9NZC2) Pfam (PF07686) In PDB | Homo sapiens (human) | TREM-2,Triggering receptor expressed on monocytes 2 |
3 | G, H, I, J, K... | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) | |||
4 | J | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 1 | Chemie (MPD) | |||
5 | water | water | 18.0 | 13 | Chemie (HOH) |
Sequence modifications
G, H, I, J, K, D000: 19 - 131 (UniProt: Q9NZC2)
PDB | External Database | Details |
---|---|---|
Glu 16 | - | expression tag |
Thr 17 | - | expression tag |
Gly 18 | - | expression tag |
Gly 132 | - | expression tag |
Thr 133 | - | expression tag |
Lys 134 | - | expression tag |
His 135 | - | expression tag |
His 136 | - | expression tag |
His 137 | - | expression tag |
His 138 | - | expression tag |
His 139 | - | expression tag |
His 140 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 241876.9 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 1445.4 | |
All* | Total formula weight | 243322.3 |