6XFQ
Structure of a novel antithrombotic agent Agkisacucetin in complex with the platelet glycoprotein Ib receptor
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | G | Platelet glycoprotein Ib alpha chain | polymer | 305 | 34010.8 | 1 | UniProt (P07359) Pfam (PF01462) Pfam (PF13855) In PDB | Homo sapiens (Human) | Glycoprotein Ibalpha,Antigen CD42b-alpha |
| 2 | A | Snaclec agglucetin subunit alpha-1 | polymer | 154 | 17334.5 | 1 | UniProt (Q8JIV9) Pfam (PF00059) In PDB | Deinagkistrodon acutus (Hundred-pace snake) | Agkisacucetin subunit alpha |
| 3 | B | Snaclec agglucetin subunit beta-2 | polymer | 149 | 17259.0 | 1 | UniProt (Q8AYA3) Pfam (PF00059) In PDB | Deinagkistrodon acutus (Hundred-pace snake) | Antithrombin 1 chain B |
| 4 | water | water | 18.0 | 6 | Chemie (HOH) |
Sequence modifications
G: 1 - 305 (UniProt: P07359)
| PDB | External Database | Details |
|---|---|---|
| Gln 21 | Asn 37 | conflict |
| Gln 159 | Asn 175 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 68604.3 | |
| All* | Total formula weight | 68604.3 |
