Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6VNP

Crystal structure of DPO4 extension past 8-oxoadenine (oxoA) and dT

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1P, B, E, HDNA (5'-D(P*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*T)-3')polymer144400.94Homo sapiens
2T, C, F, IDNA (5'-D(*TP*TP*CP*AP*T*(R5M)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3')polymer195691.74Homo sapiens
3A, D, G, JDNA polymerase IVpolymer34139019.54UniProt (A0A0E3K6E9)
Pfam (PF00817)
Pfam (PF11798)
Pfam (PF11799)
UniProt (by SIFTS) (Q97W02)
In PDB
Saccharolobus solfataricusPol IV
4A, D, G, J2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosinenon-polymer490.24Chemie (DZ4)
5A, D, G, JMAGNESIUM IONnon-polymer24.38Chemie (MG)
6waterwater18.0363Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight196448.3
Non-Polymers*Number of molecules12
Total formula weight2155.2
All*Total formula weight198603.5
*Water molecules are not included.

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon