6TOP
Structure of the PorE C-terminal domain, a protein of T9SS from Porphyromonas gingivalis
Replaces: 6I9OEntity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | OmpA family protein | polymer | 154 | 17602.7 | 1 | UniProt (T2NEY1) Pfam (PF00691) In PDB | Porphyromonas gingivalis JCVI SC001 | |
2 | B, C, D | OmpA family protein | polymer | 150 | 17050.1 | 3 | UniProt (T2NEY1) Pfam (PF00691) In PDB | Porphyromonas gingivalis JCVI SC001 | |
3 | A, B, C, D | GLCNAC(BETA1-4)-MURNAC(1,6-ANHYDRO)-L-ALA-GAMMA-D-GLU-MESO-A2PM-D-ALA | non-polymer | 921.9 | 4 | Chemie (MLD) | |||
4 | A, B, C, D | SODIUM ION | non-polymer | 23.0 | 4 | Chemie (NA) | |||
5 | water | water | 18.0 | 754 | Chemie (HOH) |
Sequence modifications
A: 534 - 668 (UniProt: T2NEY1)
B, C, D: 534 - 668 (UniProt: T2NEY1)
PDB | External Database | Details |
---|---|---|
His -19 | - | expression tag |
His -18 | - | expression tag |
His -17 | - | expression tag |
His -16 | - | expression tag |
Ser -15 | - | expression tag |
Ser -14 | - | expression tag |
Gly -13 | - | expression tag |
Val -12 | - | expression tag |
Asp -11 | - | expression tag |
Leu -10 | - | expression tag |
Gly -9 | - | expression tag |
Thr -8 | - | expression tag |
Glu -7 | - | expression tag |
Asn -6 | - | expression tag |
Leu -5 | - | expression tag |
Tyr -4 | - | expression tag |
Phe -3 | - | expression tag |
Gln -2 | - | expression tag |
Ser -1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser -15 | - | expression tag |
Ser -14 | - | expression tag |
Gly -13 | - | expression tag |
Val -12 | - | expression tag |
Asp -11 | - | expression tag |
Leu -10 | - | expression tag |
Gly -9 | - | expression tag |
Thr -8 | - | expression tag |
Glu -7 | - | expression tag |
Asn -6 | - | expression tag |
Leu -5 | - | expression tag |
Tyr -4 | - | expression tag |
Phe -3 | - | expression tag |
Gln -2 | - | expression tag |
Ser -1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 68752.9 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 3779.6 | |
All* | Total formula weight | 72532.4 |