6T2Q
Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | AAA, BBB | Glycosyl hydrolase family 16 | polymer | 282 | 32249.3 | 2 | UniProt (A5ZIF0) In PDB | Bacteroides caccae ATCC 43185 | |
2 | A, B | beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose | branched | 545.5 | 2 | In PDB GlyTouCan (G06580KR) | |||
3 | AAA, BBB | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
4 | AAA, BBB | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
5 | AAA, BBB | SODIUM ION | non-polymer | 23.0 | 6 | Chemie (NA) | |||
6 | water | water | 18.0 | 99 | Chemie (HOH) |
Sequence modifications
AAA, BBB: 22 - 280 (UniProt: A5ZIF0)
PDB | External Database | Details |
---|---|---|
Met -1 | - | initiating methionine |
Gly 0 | - | expression tag |
Ser 1 | - | expression tag |
Ser 2 | - | expression tag |
His 3 | - | expression tag |
His 4 | - | expression tag |
His 5 | - | expression tag |
His 6 | - | expression tag |
His 7 | - | expression tag |
His 8 | - | expression tag |
Ser 9 | - | expression tag |
Ser 10 | - | expression tag |
Gly 11 | - | expression tag |
Leu 12 | - | expression tag |
Val 13 | - | expression tag |
Pro 14 | - | expression tag |
Arg 15 | - | expression tag |
Gly 16 | - | expression tag |
Ser 17 | - | expression tag |
His 18 | - | expression tag |
Met 19 | - | expression tag |
Ala 20 | - | expression tag |
Ser 21 | - | expression tag |
Gln 143 | Glu 143 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 64498.5 | |
Branched | Number of molecules | 2 |
Total formula weight | 1091.0 | |
Non-Polymers* | Number of molecules | 10 |
Total formula weight | 342.2 | |
All* | Total formula weight | 65931.7 |