6SPG
Pseudomonas aeruginosa 70s ribosome from a clinical isolate
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | a | 16S ribosomal RNA | polymer | 1526 | 494643.9 | 1 | GenBank (1353913695) | Pseudomonas aeruginosa | |
2 | b | 30S ribosomal protein S2 | polymer | 239 | 26684.8 | 1 | UniProt (A0A072ZPV8) Pfam (PF00318) In PDB | Pseudomonas aeruginosa | |
3 | c | 30S ribosomal protein S3 | polymer | 205 | 23438.2 | 1 | UniProt (A0A140S919) Pfam (PF07650) Pfam (PF00189) In PDB | Pseudomonas aeruginosa | |
4 | d | 30S ribosomal protein S4 | polymer | 205 | 23187.5 | 1 | UniProt (A0A072ZDF7) Pfam (PF00163) Pfam (PF01479) In PDB | Pseudomonas aeruginosa | |
5 | e | 30S ribosomal protein S5 | polymer | 156 | 16432.1 | 1 | UniProt (A0A241XG65) Pfam (PF00333) Pfam (PF03719) In PDB | Pseudomonas aeruginosa | |
6 | f | 30S ribosomal protein S6 | polymer | 105 | 12278.8 | 1 | UniProt (A0A069Q263) Pfam (PF01250) In PDB | Pseudomonas aeruginosa | |
7 | g | 30S ribosomal protein S7 | polymer | 154 | 17313.2 | 1 | UniProt (A0A2V3F2U6) Pfam (PF00177) In PDB | Pseudomonas aeruginosa | |
8 | h | 30S ribosomal protein S8 | polymer | 129 | 14059.4 | 1 | UniProt (E2RXT9) Pfam (PF00410) In PDB | Pseudomonas aeruginosa | |
9 | i | 30S ribosomal protein S9 | polymer | 126 | 14139.2 | 1 | UniProt (A0A069PXX1) Pfam (PF00380) In PDB | Pseudomonas aeruginosa | |
10 | j | 30S ribosomal protein S10 | polymer | 96 | 10886.6 | 1 | UniProt (E2RXT0) Pfam (PF00338) In PDB | Pseudomonas aeruginosa | |
11 | k | 30S ribosomal protein S11 | polymer | 115 | 12086.7 | 1 | UniProt (E2RXU4) Pfam (PF00411) In PDB | Pseudomonas aeruginosa | |
12 | l | 30S ribosomal protein S12 | polymer | 121 | 13569.7 | 1 | UniProt (A0A071L394) Pfam (PF00164) In PDB | Pseudomonas aeruginosa | |
13 | m | 30S ribosomal protein S13 | polymer | 110 | 12307.2 | 1 | UniProt (E2RXU3) Pfam (PF00416) In PDB | Pseudomonas aeruginosa | |
14 | n | 30S ribosomal protein S14 | polymer | 98 | 11203.0 | 1 | UniProt (E2RXT8) Pfam (PF00253) In PDB | Pseudomonas aeruginosa | |
15 | o | 30S ribosomal protein S15 | polymer | 86 | 9776.2 | 1 | UniProt (A0A071L3R7) Pfam (PF00312) In PDB | Pseudomonas aeruginosa | |
16 | p | 30S ribosomal protein S16 | polymer | 78 | 8762.9 | 1 | UniProt (A0A2V4FRZ2) Pfam (PF00886) In PDB | Pseudomonas aeruginosa | |
17 | q | 30S ribosomal protein S17 | polymer | 76 | 8848.4 | 1 | UniProt (E2RXT5) Pfam (PF00366) In PDB | Pseudomonas aeruginosa | |
18 | r | 30S ribosomal protein S18 | polymer | 71 | 8346.7 | 1 | UniProt (A0A2V3DLV3) Pfam (PF01084) In PDB | Pseudomonas aeruginosa | |
19 | s | 30S ribosomal protein S19 | polymer | 80 | 9182.9 | 1 | UniProt (E2RXT2) Pfam (PF00203) In PDB | Pseudomonas aeruginosa | |
20 | t | 30S ribosomal protein S20 | polymer | 85 | 9426.1 | 1 | UniProt (A0A072ZDZ9) Pfam (PF01649) In PDB | Pseudomonas aeruginosa | |
21 | u | 30S ribosomal protein S21 | polymer | 63 | 7519.8 | 1 | UniProt (A0A069QC99) Pfam (PF01165) In PDB | Pseudomonas aeruginosa | |
22 | A | 23S ribosomal RNA | polymer | 2888 | 935990.4 | 1 | REF (470469287) | Pseudomonas aeruginosa | |
23 | B | 5S ribosomal RNA | polymer | 117 | 37679.4 | 1 | GenBank (1384417243) | Pseudomonas aeruginosa | |
24 | C | 50S ribosomal protein L2 | polymer | 271 | 29439.0 | 1 | UniProt (A0A241XHA2) Pfam (PF00181) Pfam (PF03947) In PDB | Pseudomonas aeruginosa | |
25 | D | 50S ribosomal protein L3 | polymer | 207 | 22179.2 | 1 | UniProt (A0A072ZBZ2) Pfam (PF00297) In PDB | Pseudomonas aeruginosa | |
26 | E | 50S ribosomal protein L4 | polymer | 199 | 21542.7 | 1 | UniProt (A0A241XH26) Pfam (PF00573) In PDB | Pseudomonas aeruginosa | |
27 | F | 50S ribosomal protein L5 | polymer | 174 | 19804.1 | 1 | UniProt (A0A072ZMU2) Pfam (PF00281) Pfam (PF00673) In PDB | Pseudomonas aeruginosa | |
28 | G | 50S ribosomal protein L6 | polymer | 173 | 18610.4 | 1 | UniProt (A0A2V3F3S9) Pfam (PF00347) In PDB | Pseudomonas aeruginosa | |
29 | H | 50S ribosomal protein L9 | polymer | 78 | 8216.4 | 1 | UniProt (A0A072ZKF0) Pfam (PF01281) In PDB | Pseudomonas aeruginosa | |
30 | I | 50S ribosomal protein L11 | polymer | 140 | 14623.7 | 1 | UniProt (A0A2V3GYK0) Pfam (PF03946) Pfam (PF00298) In PDB | Pseudomonas aeruginosa | |
31 | J | 50S ribosomal protein L13 | polymer | 141 | 15927.4 | 1 | UniProt (A0A071L356) Pfam (PF00572) In PDB | Pseudomonas aeruginosa | |
32 | K | 50S ribosomal protein L14 | polymer | 120 | 13223.6 | 1 | UniProt (E2RXT6) Pfam (PF00238) In PDB | Pseudomonas aeruginosa | |
33 | L | 50S ribosomal protein L15 | polymer | 143 | 15073.3 | 1 | UniProt (A0A2V3D5Z8) Pfam (PF00828) In PDB | Pseudomonas aeruginosa | |
34 | M | 50S ribosomal protein L16 | polymer | 135 | 15203.9 | 1 | UniProt (A0A069QEB6) Pfam (PF00252) In PDB | Pseudomonas aeruginosa | |
35 | N | 50S ribosomal protein L17 | polymer | 118 | 13495.8 | 1 | UniProt (A0A072ZCA1) Pfam (PF01196) In PDB | Pseudomonas aeruginosa | |
36 | O | 50S ribosomal protein L18 | polymer | 115 | 12556.5 | 1 | UniProt (E2RXU0) Pfam (PF00861) In PDB | Pseudomonas aeruginosa | |
37 | P | 50S ribosomal protein L19 | polymer | 113 | 12708.8 | 1 | UniProt (A0A263PZC6) Pfam (PF01245) In PDB | Pseudomonas aeruginosa | |
38 | Q | 50S ribosomal protein L20 | polymer | 117 | 13266.8 | 1 | UniProt (A0A069QEE3) Pfam (PF00453) In PDB | Pseudomonas aeruginosa | |
39 | R | 50S ribosomal protein L21 | polymer | 102 | 11607.5 | 1 | UniProt (A0A072ZDZ0) Pfam (PF00829) In PDB | Pseudomonas aeruginosa | |
40 | S | 50S ribosomal protein L22 | polymer | 109 | 11804.8 | 1 | UniProt (A0A1C7BCP0) Pfam (PF00237) In PDB | Pseudomonas aeruginosa | |
41 | T | 50S ribosomal protein L23 | polymer | 92 | 10231.9 | 1 | UniProt (E2RXT1) Pfam (PF00276) In PDB | Pseudomonas aeruginosa | |
42 | U | 50S ribosomal protein L24 | polymer | 103 | 11423.4 | 1 | UniProt (E2RXT7) Pfam (PF00467) Pfam (PF17136) In PDB | Pseudomonas aeruginosa | |
43 | V | 50S ribosomal protein L25 | polymer | 188 | 20346.5 | 1 | UniProt (A0A072ZBM5) Pfam (PF01386) Pfam (PF14693) In PDB | Pseudomonas aeruginosa | General stress protein CTC |
44 | W | 50S ribosomal protein L27 | polymer | 76 | 8124.4 | 1 | UniProt (A0A071LFT4) Pfam (PF01016) In PDB | Pseudomonas aeruginosa | |
45 | X | 50S ribosomal protein L28 | polymer | 77 | 8956.4 | 1 | UniProt (A0A072ZIQ9) Pfam (PF00830) In PDB | Pseudomonas aeruginosa | |
46 | Y | Ribosomal protein uL29 | polymer | 60 | 6807.8 | 1 | Pseudomonas aeruginosa | ||
47 | Z | 50S ribosomal protein L30 | polymer | 57 | 6358.4 | 1 | UniProt (E2RXU1) Pfam (PF00327) In PDB | Pseudomonas aeruginosa | |
48 | 1 | 50S ribosomal protein L31 | polymer | 31 | 3368.9 | 1 | UniProt (A0A072ZJG4) Pfam (PF01197) In PDB | Pseudomonas aeruginosa | |
49 | 2 | 50S ribosomal protein L32 | polymer | 53 | 6043.8 | 1 | UniProt (A0A069QB25) Pfam (PF01783) In PDB | Pseudomonas aeruginosa | |
50 | 3 | 50S ribosomal protein L33 | polymer | 50 | 5928.9 | 1 | UniProt (A0A140SG33) Pfam (PF00471) In PDB | Pseudomonas aeruginosa | |
51 | 4 | 50S ribosomal protein L34 | polymer | 44 | 5226.3 | 1 | UniProt (A0A087L9L7) Pfam (PF00468) In PDB | Pseudomonas aeruginosa | |
52 | 5 | 50S ribosomal protein L35 | polymer | 63 | 7256.8 | 1 | UniProt (A0A069QC44) Pfam (PF01632) In PDB | Pseudomonas aeruginosa | |
53 | 6 | 50S ribosomal protein L36 | polymer | 38 | 4447.4 | 1 | UniProt (E2RXU2) Pfam (PF00444) In PDB | Pseudomonas aeruginosa | |
54 | A, a, B, D, P | MAGNESIUM ION | non-polymer | 24.3 | 172 | Chemie (MG) |
Sequence modifications
a: 2 - 1527 (GenBank: 1353913695)
r: 4 - 74 (UniProt: A0A2V3DLV3)
u: 4 - 67 (UniProt: A0A069QC99)
A: 2 - 2889 (REF: 470469287)
F: 3 - 176 (UniProt: A0A072ZMU2)
V: 4 - 191 (UniProt: A0A072ZBM5)
W: 10 - 85 (UniProt: A0A071LFT4)
PDB | External Database | Details |
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A 72 | G 891104 | conflict |
PDB | External Database | Details |
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Arg 9 | Lys 9 | conflict |
PDB | External Database | Details |
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Ala 28 | Val 28 | conflict |
PDB | External Database | Details |
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A 361 | G 361 | conflict |
G 2872 | U 2872 | conflict |
PDB | External Database | Details |
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Leu 7 | Ile 7 | conflict |
PDB | External Database | Details |
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Val 6 | Leu 6 | conflict |
Val 71 | Ala 71 | conflict |
PDB | External Database | Details |
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Leu 40 | Gln 40 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 53 |
Total formula weight | 2111568.0 | |
Non-Polymers* | Number of molecules | 172 |
Total formula weight | 4180.5 | |
All* | Total formula weight | 2115748.4 |