6SA0
Ternary complex of Prim-PolC from Mycobacterium smegmatis with 2nt gapped DNA and UpNHpp
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, D | DNA polymerase LigD, polymerase domain | polymer | 350 | 39416.5 | 2 | UniProt (A0R5T1) Pfam (PF21686) In PDB | Mycolicibacterium smegmatis MC2 155 | |
2 | B, E | DNA (5'-D(P*GP*CP*GP*AP*GP*CP*G)-3') | polymer | 7 | 2163.4 | 2 | synthetic construct | ||
3 | C, F | DNA (5'-D(*CP*GP*CP*TP*CP*GP*CP*AP*AP*CP*GP*CP*A)-3') | polymer | 15 | 4540.0 | 2 | synthetic construct | ||
4 | H, G | DNA (5'-D(P*TP*GP*CP*GP)-3') | polymer | 6 | 1825.2 | 2 | synthetic construct | ||
5 | A, D | 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine | non-polymer | 483.2 | 2 | Chemie (2KH) | |||
6 | A, D | MANGANESE (II) ION | non-polymer | 54.9 | 4 | Chemie (MN) | |||
7 | A | CACODYLATE ION | non-polymer | 137.0 | 1 | Chemie (CAC) | |||
8 | A, D | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
9 | water | water | 18.0 | 458 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 95890.3 | |
Non-Polymers* | Number of molecules | 10 |
Total formula weight | 1509.3 | |
All* | Total formula weight | 97399.6 |