6N93
Methylmalonyl-CoA decarboxylase in complex with 2-nitronate-propionyl-oxa(dethia)-CoA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... | Methylmalonyl-CoA decarboxylase | polymer | 261 | 29190.6 | 6 | UniProt (P52045) Pfam (PF00378) In PDB | Escherichia coli (strain K12) | MMCD,Transcarboxylase |
| 2 | A, B, C, D, E... | [1-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethoxy]-1-oxidanylidene-propan-2-ylidene]-bis(oxidanidyl)azanium | non-polymer | 851.5 | 9 | Chemie (KGA) | |||
| 3 | A, D, F | NICKEL (II) ION | non-polymer | 58.7 | 3 | Chemie (NI) | |||
| 4 | A, D, F | IMIDAZOLE | non-polymer | 69.1 | 3 | Chemie (IMD) | |||
| 5 | C | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
| 6 | C | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 1 | Chemie (PG4) | |||
| 7 | F | (2E)-2-(hydroxyimino)propanoic acid | non-polymer | 103.1 | 1 | Chemie (KG7) | |||
| 8 | water | water | 18.0 | 1965 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 261 (UniProt: P52045)
| PDB | External Database | Details |
|---|---|---|
| Ala 2 | Ser 2 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 175143.3 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 8383.4 | |
| All* | Total formula weight | 183526.8 |
