6C1T
MBD2 in complex with a partially methylated DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D | Methyl-CpG-binding domain protein 2 | polymer | 79 | 8791.2 | 2 | UniProt (Q9UBB5) Pfam (PF01429) In PDB | Homo sapiens (Human) | Demethylase,DMTase,Methyl-CpG-binding protein MBD2 |
| 2 | B | 12-mer DNA | polymer | 12 | 3597.4 | 1 | synthetic construct | ||
| 3 | C | 12-mer DNA | polymer | 12 | 3743.4 | 1 | synthetic construct | ||
| 4 | A | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 5 | D, A, B, C | UNKNOWN ATOM OR ION | non-polymer | 24 | Chemie (UNX) | ||||
| 6 | C | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 7 | water | water | 18.0 | 41 | Chemie (HOH) |
Sequence modifications
A, D: 143 - 220 (UniProt: Q9UBB5)
| PDB | External Database | Details |
|---|---|---|
| Gly 142 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 24923.2 | |
| Non-Polymers* | Number of molecules | 26 |
| Total formula weight | 188.2 | |
| All* | Total formula weight | 25111.3 |
