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6B9P

Structure of GH 38 Jack Bean alpha-mannosidase in complex with a 36-valent iminosugar cluster inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BAlpha-mannosidase from Canavalia ensiformis (jack bean)polymer981111225.62Pfam (PF01074)
Pfam (PF09261)
Pfam (PF07748)
UniProt (by SIFTS) (C0HJB3)
In PDB
Canavalia ensiformis
2C, Ealpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched2045.82In PDB
GlyTouCan (G77969OS)
3D, F2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.42In PDB
GlyTouCan (G42666HT)
4A, B(2R,3R,4R,5S)-2-(hydroxymethyl)-1-{9-[4-(methoxymethyl)-1H-1,2,3-triazol-1-yl]nonyl}piperidine-3,4,5-triolnon-polymer400.52Chemie (D0J)
5A, BZINC IONnon-polymer65.42Chemie (ZN)
6waterwater18.01367Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight222451.2
BranchedNumber of molecules4
Total formula weight4940.4
Non-Polymers*Number of molecules4
Total formula weight931.8
All*Total formula weight228323.5
*Water molecules are not included.

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PDB entries from 2024-05-15

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