5ZBX
The crystal structure of the nucleosome containing histone H3.1 CATD(V76Q, K77D)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E | Histone H3.1,Histone H3-like centromeric protein A,Histone H3.1 | polymer | 141 | 16078.8 | 2 | UniProt (P68431) UniProt (P49450) Pfam (PF00125) In PDB | Homo sapiens (Human) | Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l,Centromere autoantigen A,Centromere protein A,CENP-A |
2 | B, F | Histone H4 | polymer | 106 | 11676.7 | 2 | UniProt (P62805) Pfam (PF15511) In PDB | Homo sapiens (Human) | |
3 | C, G | Histone H2A type 1-B/E | polymer | 133 | 14447.8 | 2 | UniProt (P04908) Pfam (PF00125) Pfam (PF16211) In PDB | Homo sapiens (Human) | Histone H2A.2,Histone H2A/a,Histone H2A/m |
4 | D, H | Histone H2B type 1-J | polymer | 129 | 14217.5 | 2 | UniProt (P06899) Pfam (PF00125) In PDB | Homo sapiens (Human) | Histone H2B.1,Histone H2B.r,H2B/r |
5 | I, J | DNA (146-MER) | polymer | 146 | 45053.9 | 2 | Homo sapiens | ||
6 | C, G | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
7 | E, I, J | MANGANESE (II) ION | non-polymer | 54.9 | 8 | Chemie (MN) | |||
8 | water | water | 18.0 | 4 | Chemie (HOH) |
Sequence modifications
A, E: 0 - 74 (UniProt: P68431)
A, E: 75 - 114 (UniProt: P49450)
A, E: 115 - 137 (UniProt: P68431)
B, F: 0 - 102 (UniProt: P62805)
C, G: 0 - 129 (UniProt: P04908)
D, H: 0 - 125 (UniProt: P06899)
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gln 76 | Val 76 | engineered mutation |
Asp 77 | Lys 77 | engineered mutation |
B, F: 0 - 102 (UniProt: P62805)
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 202949.4 | |
Non-Polymers* | Number of molecules | 10 |
Total formula weight | 510.4 | |
All* | Total formula weight | 203459.9 |