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5Y6G

PilZ domain with c-di-GMP of YcgR from Escherichia coli

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AFlagellar brake protein YcgRpolymer14717155.71UniProt (P76010)
Pfam (PF07238)
In PDB
Escherichia coli K-12Cyclic di-GMP binding protein YcgR
2A9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)non-polymer690.42Chemie (C2E)
3ASULFATE IONnon-polymer96.11Chemie (SO4)
4waterwater18.045Chemie (HOH)
Sequence modifications
A: 112 - 244 (UniProt: P76010)
PDBExternal DatabaseDetails
Met 111-initiating methionine
Lys 245-expression tag
Leu 246-expression tag
Ala 247-expression tag
Ala 248-expression tag
Ala 249-expression tag
Leu 250-expression tag
Glu 251-expression tag
His 252-expression tag
His 253-expression tag
His 254-expression tag
His 255-expression tag
His 256-expression tag
His 257-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight17155.7
Non-Polymers*Number of molecules3
Total formula weight1476.9
All*Total formula weight18632.6
*Water molecules are not included.

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PDB entries from 2024-06-12

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