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5VMF

Influenza hemagglutinin H1 mutant DH1D in complex with 6'SLN

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, EHemagglutinin HA1polymer32635998.33UniProt (Q9WFX3)
Pfam (PF00509)
In PDB
Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)
2B, D, FHemagglutinin HA2polymer19121725.13UniProt (Q9WFX3)
Pfam (PF00509)
In PDB
Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)
3Gbeta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.51In PDB
GlyTouCan (G15407YE)
4H, I, KN-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched674.63In PDB
BIRD (PRD_900046)
GlyTouCan (G73578JC)
6'-sialyl-N-acetyllactosamine
5J2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.41In PDB
GlyTouCan (G42666HT)
6A, C2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.23Chemie (NAG)
7waterwater18.0900Chemie (HOH)
Sequence modifications
A, C, E: 1 - 326 (UniProt: Q9WFX3)
PDBExternal DatabaseDetails
Leu 222Gln 240engineered mutation
Ser 224Gly 242engineered mutation
B, D, F: 1 - 185 (UniProt: Q9WFX3)
PDBExternal DatabaseDetails
Gly 186-expression tag
Ala 187-expression tag
Leu 188-expression tag
Val 189-expression tag
Pro 190-expression tag
Arg 191-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight173170.2
BranchedNumber of molecules5
Total formula weight3034.8
Non-Polymers*Number of molecules3
Total formula weight663.6
All*Total formula weight176868.6
*Water molecules are not included.

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PDB entries from 2024-05-15

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