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5VMC

Influenza hemagglutinin H1 mutant DH1 in complex with 6'SLN

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, EHemagglutinin HA1polymer32635983.33UniProt (Q9WFX3)
Pfam (PF00509)
In PDB
Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)
2B, D, FHemagglutinin HA2polymer19121725.13UniProt (Q9WFX3)
Pfam (PF00509)
In PDB
Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)
3Gbeta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.51In PDB
GlyTouCan (G15407YE)
4H, J, LN-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched674.63In PDB
BIRD (PRD_900046)
GlyTouCan (G73578JC)
6'-sialyl-N-acetyllactosamine
5I, K2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.42In PDB
GlyTouCan (G42666HT)
6A, C2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
7waterwater18.01326Chemie (HOH)
Sequence modifications
A, C, E: 1 - 326 (UniProt: Q9WFX3)
PDBExternal DatabaseDetails
-Lys 147deletion
B, D, F: 1 - 185 (UniProt: Q9WFX3)
PDBExternal DatabaseDetails
Gly 186-expression tag
Ala 187-expression tag
Leu 188-expression tag
Val 189-expression tag
Pro 190-expression tag
Arg 191-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight173125.0
BranchedNumber of molecules6
Total formula weight3459.2
Non-Polymers*Number of molecules2
Total formula weight442.4
All*Total formula weight177026.6
*Water molecules are not included.

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PDB entries from 2024-05-15

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