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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

5V93

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1050S ribosomal protein L32polymer576525.81UniProt (A0A045IMI5)
Pfam (PF01783)
UniProt (by SIFTS) (P9WH99)
In PDB		Mycobacterium tuberculosis
2150S ribosomal protein L33polymer556512.61UniProt (A0A045HU86)
In PDB		Mycobacterium tuberculosis
3250S ribosomal protein L34polymer475611.61UniProt (A0A1L6JUG3)
Pfam (PF00468)
UniProt (by SIFTS) (P9WH93)
In PDB		Mycobacterium tuberculosis
4350S ribosomal protein L35polymer647241.41UniProt (A0A045KKY9)
Pfam (PF01632)
UniProt (by SIFTS) (P9WH91)
In PDB		Mycobacterium tuberculosis
5450S ribosomal protein L36polymer374323.21UniProt (A0A1L6JSF4)
Pfam (PF00444)
UniProt (by SIFTS) (P9WH89)
In PDB		Mycobacterium tuberculosis
6650S ribosomal protein L31polymer808770.11UniProt (A0A045HLX7)
Pfam (PF01197)
UniProt (by SIFTS) (P9WHA1)
In PDB		Mycobacterium tuberculosis
7A23S rRNApolymer31381017792.61GenBank (984989958)Mycobacterium tuberculosis
8B5S rRNApolymer11537097.21GenBank (1092945381)Mycobacterium tuberculosis
9C50S ribosomal protein L2polymer28030644.01UniProt (A0A045H5T7)
Pfam (PF01783)
UniProt (by SIFTS) (P9WH99)
In PDB		Mycobacterium tuberculosis
10D50S ribosomal protein L3polymer21723127.51UniProt (A0A045HU18)
Pfam (PF00297)
UniProt (by SIFTS) (P9WH87)
In PDB		Mycobacterium tuberculosis
11E50S ribosomal protein L4polymer22323779.91UniProt (A0A045J9H1)
Pfam (PF00573)
UniProt (by SIFTS) (P9WH85)
In PDB		Mycobacterium tuberculosis
12F50S ribosomal protein L5polymer18721052.31UniProt (A0A045HUU0)
Pfam (PF00673)
Pfam (PF00281)
UniProt (by SIFTS) (P9WH83)
In PDB		Mycobacterium tuberculosis
13G50S ribosomal protein L6polymer17919408.41UniProt (A0A045JJU1)
Pfam (PF00347)
UniProt (by SIFTS) (P9WH81)
In PDB		Mycobacterium tuberculosis
14H50S ribosomal protein L9polymer15216196.71UniProt (A0A045JW48)
Pfam (PF01281)
Pfam (PF03948)
UniProt (by SIFTS) (P9WH79)
In PDB		Mycobacterium tuberculosis
15J50S ribosomal protein L13polymer14716333.91UniProt (A0A0T9D5H2)
Pfam (PF00572)
UniProt (by SIFTS) (P9WHE1)
In PDB		Mycobacterium tuberculosis
16K50S ribosomal protein L14polymer12213419.61UniProt (A0A0U0S3A8)
Pfam (PF00238)
UniProt (by SIFTS) (P9WHD9)
In PDB		Mycobacterium tuberculosis
17L50S ribosomal protein L15polymer14615534.11UniProt (A0A0T7M0A0)
Pfam (PF00828)
UniProt (by SIFTS) (P9WHD7)
In PDB		Mycobacterium tuberculosis
18M50S ribosomal protein L16polymer13815724.31UniProt (A0A045IWV9)
Pfam (PF00252)
UniProt (by SIFTS) (P9WHD5)
In PDB		Mycobacterium tuberculosis
19N50S ribosomal protein L17polymer18019512.31UniProt (A0A045IVA2)
Pfam (PF01196)
UniProt (by SIFTS) (P9WHD3)
In PDB		Mycobacterium tuberculosis
20O50S ribosomal protein L18polymer12213211.11UniProt (A0A045JK28)
Pfam (PF00861)
UniProt (by SIFTS) (P9WHD1)
In PDB		Mycobacterium tuberculosis
21P50S ribosomal protein L19polymer11313041.11UniProt (A0A045IDD2)
Pfam (PF01245)
UniProt (by SIFTS) (P9WHC9)
In PDB		Mycobacterium tuberculosis
22Q50S ribosomal protein L20polymer12914557.81UniProt (A0A045KJ85)
Pfam (PF00453)
UniProt (by SIFTS) (P9WHC5)
In PDB		Mycobacterium tuberculosis
23RLSU ribosomal protein L21ppolymer10411173.11UniProt (A0A1N6MHB1)
Pfam (PF00829)
UniProt (by SIFTS) (P9WHC3)
In PDB		Mycobacterium tuberculosisRibosomal protein L21 (BL20)
24S50S ribosomal protein L22polymer19720424.61UniProt (A0A045H760)
Pfam (PF00237)
UniProt (by SIFTS) (P9WHC1)
In PDB		Mycobacterium tuberculosis
25T50S ribosomal protein L23polymer10010976.81UniProt (A0A045J9M3)
Pfam (PF00276)
UniProt (by SIFTS) (P9WHB9)
In PDB		Mycobacterium tuberculosis
26U50S ribosomal protein L24polymer10511500.31UniProt (A0A045IXU4)
Pfam (PF00467)
Pfam (PF17136)
UniProt (by SIFTS) (P9WHB7)
In PDB		Mycobacterium tuberculosis
27V50S ribosomal protein L25polymer21522466.21UniProt (A0A045JAK4)
Pfam (PF01386)
Pfam (PF14693)
UniProt (by SIFTS) (P9WHB5)
In PDB		Mycobacterium tuberculosisGeneral stress protein CTC
28W50S ribosomal protein L27polymer868987.31UniProt (A0A045K0G1)
Pfam (PF01016)
UniProt (by SIFTS) (P9WHB3)
In PDB		Mycobacterium tuberculosis
29X50S ribosomal protein L28polymer646920.11UniProt (A0A045IDB8)
Pfam (PF00830)
UniProt (by SIFTS) (P0DV54)
In PDB		Mycobacterium tuberculosis
30Y50S ribosomal protein L29polymer778872.01UniProt (A0A045IQ64)
Pfam (PF00831)
UniProt (by SIFTS) (P9WHA7)
In PDB		Mycobacterium tuberculosis
31Z50S ribosomal protein L30polymer657361.61UniProt (A0A045H4J2)
Pfam (PF00327)
UniProt (by SIFTS) (P9WHA3)
In PDB		Mycobacterium tuberculosis
32a16S rRNApolymer1537498260.41GenBank (1050844762)Mycobacterium tuberculosis
33bCapreomycinpolymer6670.71NOR (NOR00639)
BIRD (PRD_002272)		Streptomyces puniceus
34c30S ribosomal protein S3polymer27430039.01UniProt (A0A045H4H6)
Pfam (PF07650)
Pfam (PF00189)
UniProt (by SIFTS) (P9WH37)
In PDB		Mycobacterium tuberculosis
35d30S ribosomal protein S4polymer20123515.91UniProt (A0A045GRS4)
Pfam (PF00163)
Pfam (PF01479)
UniProt (by SIFTS) (P9WH35)
In PDB		Mycobacterium tuberculosis
36e30S ribosomal protein S5polymer22022925.21UniProt (A0A045JKV0)
Pfam (PF00333)
Pfam (PF03719)
UniProt (by SIFTS) (P9WH33)
In PDB		Mycobacterium tuberculosis
37f30S ribosomal protein S6polymer9610952.71UniProt (A0A045JVY9)
Pfam (PF01250)
UniProt (by SIFTS) (P9WH31)
In PDB		Mycobacterium tuberculosis
38g30S ribosomal protein S7polymer15617633.41UniProt (A0A045JMN7)
Pfam (PF00177)
UniProt (by SIFTS) (P9WH29)
In PDB		Mycobacterium tuberculosis
39h30S ribosomal protein S8polymer13214432.61UniProt (A0A045IWX2)
Pfam (PF00410)
UniProt (by SIFTS) (P9WH27)
In PDB		Mycobacterium tuberculosis
40i30S ribosomal protein S9polymer15116465.11UniProt (A0A045I839)
Pfam (PF00380)
UniProt (by SIFTS) (P9WH25)
In PDB		Mycobacterium tuberculosis
41j30S ribosomal protein S10polymer10111420.31UniProt (A0A045HTN2)
Pfam (PF00338)
UniProt (by SIFTS) (P9WH67)
In PDB		Mycobacterium tuberculosis
42k30S ribosomal protein S11polymer13914815.91UniProt (A0A045I821)
Pfam (PF00411)
UniProt (by SIFTS) (P9WH65)
In PDB		Mycobacterium tuberculosis
43l30S ribosomal protein S12polymer12413882.31UniProt (M9TET4)
Pfam (PF00164)
UniProt (by SIFTS) (P9WH63)
In PDB		Mycobacterium tuberculosis
44m30S ribosomal protein S13polymer12414383.81UniProt (A0A045GT82)
Pfam (PF00416)
UniProt (by SIFTS) (P9WH61)
In PDB		Mycobacterium tuberculosis
45n30S ribosomal protein S14 type Zpolymer616841.21UniProt (A0A045HUG3)
Pfam (PF00253)
UniProt (by SIFTS) (P9WH57)
In PDB		Mycobacterium tuberculosis
46o30S ribosomal protein S15polymer8910500.31UniProt (A0A045JF49)
Pfam (PF00312)
UniProt (by SIFTS) (P9WH55)
In PDB		Mycobacterium tuberculosis
47p30S ribosomal protein S16polymer16217466.11UniProt (A0A045JER3)
Pfam (PF00886)
UniProt (by SIFTS) (P9WH53)
In PDB		Mycobacterium tuberculosis
48q30S ribosomal protein S17polymer13514776.41UniProt (A0A0E9AP91)
Pfam (PF00366)
UniProt (by SIFTS) (P9WH51)
In PDB		Mycobacterium tuberculosis
49r30S ribosomal protein S18polymer849565.31UniProt (A0A045JW21)
Pfam (PF01084)
UniProt (by SIFTS) (P9WH49)
In PDB		Mycobacterium tuberculosis
50s30S ribosomal protein S19polymer9310830.61UniProt (A0A045IXT2)
Pfam (PF00203)
UniProt (by SIFTS) (P9WH45)
In PDB		Mycobacterium tuberculosis
51t30S ribosomal protein S20polymer869396.91UniProt (A0A045GXQ2)
Pfam (PF01649)
UniProt (by SIFTS) (P9WH41)
In PDB		Mycobacterium tuberculosis
52xMitochondrial domain of uncharacterised function (DUF1713)polymer334164.31UniProt (A0A0T5Y2Y4)
Pfam (PF08213)
UniProt (by SIFTS) (P9WKT5)
In PDB		Mycobacterium tuberculosis
Sequence modifications
2: 1 - 47 (UniProt: A0A1L6JUG3)
PDBExternal DatabaseDetails
Val 1Met 1conflict
4: 1 - 37 (UniProt: A0A1L6JSF4)
PDBExternal DatabaseDetails
Val 1Met 1conflict
L: 1 - 146 (UniProt: A0A0T7M0A0)
PDBExternal DatabaseDetails
Val 1Met 1conflict
c: 1 - 274 (UniProt: A0A045H4H6)
PDBExternal DatabaseDetails
Val 1Met 1conflict
j: 1 - 101 (UniProt: A0A045HTN2)
PDBExternal DatabaseDetails
Val 1Met 1conflict
t: 1 - 86 (UniProt: A0A045GXQ2)
PDBExternal DatabaseDetails
Val 1Met 1conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains52
Total formula weight2231037.8
All*Total formula weight2231037.8
*Water molecules are not included.

219515

PDB entries from 2024-05-08

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