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5R7X

PanDDA analysis group deposition of ground-state model of Human JMJD1B

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BLysine-specific demethylase 3Bpolymer37243075.52UniProt (Q7LBC6)
Pfam (PF02373)
In PDB
Homo sapiens (Human)JmjC domain-containing histone demethylation protein 2B,Jumonji domain-containing protein 1B,Nuclear protein 5qNCA
2A, BCHLORIDE IONnon-polymer35.55Chemie (CL)
3A, BMANGANESE (II) IONnon-polymer54.92Chemie (MN)
4waterwater18.0707Chemie (HOH)
Sequence modifications
A, B: 1380 - 1728 (UniProt: Q7LBC6)
PDBExternal DatabaseDetails
Met 1357-initiating methionine
His 1358-expression tag
His 1359-expression tag
His 1360-expression tag
His 1361-expression tag
His 1362-expression tag
His 1363-expression tag
Ser 1364-expression tag
Ser 1365-expression tag
Gly 1366-expression tag
Val 1367-expression tag
Asp 1368-expression tag
Leu 1369-expression tag
Gly 1370-expression tag
Thr 1371-expression tag
Glu 1372-expression tag
Asn 1373-expression tag
Leu 1374-expression tag
Tyr 1375-expression tag
Phe 1376-expression tag
Gln 1377-expression tag
Ser 1378-expression tag
Met 1379-expression tag
Glu 1601Gln 1601conflict
His 1606Gly 1606conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight86151.0
Non-Polymers*Number of molecules7
Total formula weight287.1
All*Total formula weight86438.2
*Water molecules are not included.

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PDB entries from 2024-05-29

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