5ITO
Structure of the periplasmic binding protein M117N-NocT from A. tumefaciens in complex with octopine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Nopaline-binding periplasmic protein | polymer | 265 | 29242.5 | 2 | UniProt (P35120) Pfam (PF00497) In PDB | Agrobacterium fabrum (strain C58 / ATCC 33970) | |
| 2 | A | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 3 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
| 4 | A | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 1 | Chemie (1PE) | |||
| 5 | A, B | octopine | non-polymer | 246.3 | 2 | Chemie (6DB) | |||
| 6 | A | 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL | non-polymer | 164.2 | 2 | Chemie (TOE) | |||
| 7 | water | water | 18.0 | 95 | Chemie (HOH) |
Sequence modifications
A, B: 26 - 283 (UniProt: P35120)
| PDB | External Database | Details |
|---|---|---|
| Met 25 | - | initiating methionine |
| Asn 117 | Met 117 | conflict |
| His 284 | - | expression tag |
| His 285 | - | expression tag |
| His 286 | - | expression tag |
| His 287 | - | expression tag |
| His 288 | - | expression tag |
| His 289 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 58485.1 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1351.5 | |
| All* | Total formula weight | 59836.6 |
