3MLP
Early B-cell Factor 1 (Ebf1) bound to DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, E, F | Transcription factor COE1 | polymer | 402 | 45499.9 | 4 | UniProt (Q07802) Pfam (PF16422) Pfam (PF01833) Pfam (PF16423) In PDB | Mus musculus (mouse) | Ebf1, O/E-1, OE-1, Early B-cell factor |
| 2 | C, D, G, H | DNA (5'-D(*CP*TP*TP*TP*AP*TP*TP*CP*CP*CP*AP*TP*GP*GP*GP*AP*AP*TP*AP*AP*AP*G)-3') | polymer | 22 | 6750.4 | 4 | synthetic construct | ||
| 3 | A, B, E, F | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 4 | A, B, E, F | CITRIC ACID | non-polymer | 192.1 | 5 | Chemie (CIT) | |||
| 5 | water | water | 18.0 | 150 | Chemie (HOH) |
Sequence modifications
A, B, E, F: 24 - 414 (UniProt: Q07802)
| PDB | External Database | Details |
|---|---|---|
| - | Gly 252 | deletion |
| - | Thr 253 | deletion |
| - | Pro 254 | deletion |
| - | Ser 255 | deletion |
| - | Tyr 256 | deletion |
| - | Leu 257 | deletion |
| - | Glu 258 | deletion |
| Ala 252 | His 259 | engineered mutation |
| Ala 415 | - | expression tag |
| Ala 416 | - | expression tag |
| Val 417 | - | expression tag |
| Leu 418 | - | expression tag |
| Glu 419 | - | expression tag |
| His 420 | - | expression tag |
| His 421 | - | expression tag |
| His 422 | - | expression tag |
| His 423 | - | expression tag |
| His 424 | - | expression tag |
| His 425 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 209001.2 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1222.3 | |
| All* | Total formula weight | 210223.5 |
