3CHB
CHOLERA TOXIN B-PENTAMER COMPLEXED WITH GM1 PENTASACCHARIDE
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | D, E, F, G, H | CHOLERA TOXIN | polymer | 104 | 11773.5 | 5 | UniProt (P01556) Pfam (PF01376) In PDB | Vibrio cholerae | |
2 | A, C | beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-[N-acetyl-alpha-neuraminic acid-(2-3)]beta-D-galactopyranose | branched | 836.7 | 2 | ||||
3 | B, I, J | beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-[N-acetyl-alpha-neuraminic acid-(2-3)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | branched | 998.9 | 3 | ||||
4 | D, F | alpha-D-glucopyranose | non-polymer | 180.2 | 2 | Chemie (GLC) | |||
5 | D, E, F, G, H | UNKNOWN ATOM OR ION | non-polymer | 5 | Chemie (UNX) | ||||
6 | G | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 2 | Chemie (MES) | |||
7 | water | water | 18.0 | 758 | Chemie (HOH) |
Sequence modifications
D, E, F, G, H: 0 - 103 (UniProt: P01556)
PDB | External Database | Details |
---|---|---|
- | Ile 2 | deletion |
- | Lys 3 | deletion |
- | Leu 4 | deletion |
- | Lys 5 | deletion |
- | Phe 6 | deletion |
- | Gly 7 | deletion |
- | Val 8 | deletion |
- | Phe 9 | deletion |
- | Phe 10 | deletion |
- | Thr 11 | deletion |
- | Val 12 | deletion |
- | Leu 13 | deletion |
- | Leu 14 | deletion |
- | Ser 15 | deletion |
- | Ser 16 | deletion |
- | Ala 17 | deletion |
- | Tyr 18 | deletion |
- | Ala 19 | deletion |
- | His 20 | deletion |
- | Gly 21 | deletion |
His 18 | Tyr 39 | conflict |
Thr 47 | Ile 68 | conflict |
Arg 94 | His 115 | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 58867.6 | |
Branched | Number of molecules | 5 |
Total formula weight | 4670.1 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 750.8 | |
All* | Total formula weight | 64288.5 |