3CCQ
Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | 50S ribosomal protein L2P | polymer | 240 | 25354.7 | 1 | UniProt (P20276) Pfam (PF00181) Pfam (PF03947) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal2, Hl4 |
2 | B | 50S ribosomal protein L3P | polymer | 338 | 37396.4 | 1 | UniProt (P20279) Pfam (PF00297) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal3, Hl1 |
3 | C | 50S ribosomal protein L4P | polymer | 246 | 26457.1 | 1 | UniProt (P12735) Pfam (PF00573) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal4, Hl6 |
4 | D | 50S ribosomal protein L5P | polymer | 177 | 19551.7 | 1 | UniProt (P14124) Pfam (PF00281) Pfam (PF00673) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal5, Hl13 |
5 | E | 50S ribosomal protein L6P | polymer | 178 | 19961.7 | 1 | UniProt (P14135) Pfam (PF00347) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal6, Hl10 |
6 | F | 50S ribosomal protein L7Ae | polymer | 120 | 12791.9 | 1 | UniProt (P12743) Pfam (PF01248) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hs6 |
7 | G | 50S ribosomal protein L10E | polymer | 348 | 37169.8 | 1 | UniProt (P15825) Pfam (PF00466) Pfam (PF17777) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Ribosomal protein L10, Acidic ribosomal protein P0 homolog, L10E, HMal10 |
8 | H | 50S ribosomal protein L10e | polymer | 177 | 19942.7 | 1 | UniProt (P60617) Pfam (PF00252) In PDB | Haloarcula marismortui (Halobacterium marismortui) | |
9 | I | 50S ribosomal protein L11P | polymer | 162 | 17097.5 | 1 | UniProt (P14122) Pfam (PF03946) Pfam (PF00298) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal11 |
10 | J | 50S ribosomal protein L13P | polymer | 145 | 16249.2 | 1 | UniProt (P29198) Pfam (PF00572) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal13 |
11 | K | 50S ribosomal protein L14P | polymer | 132 | 14216.2 | 1 | UniProt (P22450) Pfam (PF00238) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal14, Hl27 |
12 | L | 50S ribosomal protein L15P | polymer | 165 | 18005.4 | 1 | UniProt (P12737) Pfam (PF00828) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal15, Hl9 |
13 | M | 50S ribosomal protein L15e | polymer | 196 | 22404.3 | 1 | UniProt (P60618) Pfam (PF00827) In PDB | Haloarcula marismortui (Halobacterium marismortui) | 50S ribosomal protein LC12 |
14 | N | 50S ribosomal protein L18P | polymer | 187 | 20640.9 | 1 | UniProt (P14123) Pfam (PF17144) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal18, Hl12 |
15 | O | 50S ribosomal protein L18e | polymer | 116 | 12438.9 | 1 | UniProt (P12733) Pfam (PF00828) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hl29, L19 |
16 | P | 50S ribosomal protein L19e | polymer | 149 | 16796.5 | 1 | UniProt (P14119) Pfam (PF01280) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal19, Hl24 |
17 | Q | 50S ribosomal protein L21e | polymer | 96 | 10567.8 | 1 | UniProt (P12734) Pfam (PF01157) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hl31 |
18 | R | 50S ribosomal protein L22P | polymer | 155 | 16966.9 | 1 | UniProt (P10970) Pfam (PF00237) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal22, Hl23 |
19 | S | 50S ribosomal protein L23P | polymer | 85 | 9612.5 | 1 | UniProt (P12732) Pfam (PF00276) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal23, Hl25, L21 |
20 | T | 50S ribosomal protein L24P | polymer | 120 | 13671.0 | 1 | UniProt (P10972) Pfam (PF16906) Pfam (PF00467) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal24, Hl16, Hl15 |
21 | U | 50S ribosomal protein L24e | polymer | 67 | 7364.9 | 1 | UniProt (P14116) Pfam (PF01246) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hl21/Hl22 |
22 | V | 50S ribosomal protein L29P | polymer | 71 | 7889.9 | 1 | UniProt (P10971) Pfam (PF00831) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal29, Hl33 |
23 | W | 50S ribosomal protein L30P | polymer | 154 | 17062.9 | 1 | UniProt (P14121) Pfam (PF00327) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hmal30, Hl20, Hl16 |
24 | X | 50S ribosomal protein L31e | polymer | 92 | 10384.6 | 1 | UniProt (P18138) Pfam (PF01198) In PDB | Haloarcula marismortui (Halobacterium marismortui) | L34, Hl30 |
25 | Y | 50S ribosomal protein L32e | polymer | 241 | 26455.7 | 1 | UniProt (P12736) Pfam (PF14520) Pfam (PF01655) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hl5 |
26 | Z | 50S ribosomal protein L37Ae | polymer | 116 | 12900.3 | 1 | Pfam (PF01780) UniProt (by SIFTS) (P60619) In PDB | Haloarcula marismortui (Halobacterium marismortui) | |
27 | 1 | 50S ribosomal protein L37e | polymer | 57 | 6330.2 | 1 | UniProt (P32410) Pfam (PF01907) In PDB | Haloarcula marismortui (Halobacterium marismortui) | L35e |
28 | 2 | 50S ribosomal protein L39e | polymer | 50 | 6133.1 | 1 | UniProt (P22452) Pfam (PF00832) In PDB | Haloarcula marismortui (Halobacterium marismortui) | Hl39e, Hl46e |
29 | 3 | 50S ribosomal protein L44E | polymer | 92 | 10815.2 | 1 | UniProt (P32411) Pfam (PF00935) In PDB | Haloarcula marismortui (Halobacterium marismortui) | La, Hla |
30 | 0 | 23S RIBOSOMAL RNA | polymer | 2923 | 946424.4 | 1 | Haloarcula marismortui (Halobacterium marismortui) | ||
31 | 9 | 5S RIBOSOMAL RNA | polymer | 122 | 39303.4 | 1 | GenBank (6468293) | Haloarcula marismortui (Halobacterium marismortui) | |
32 | 0, A, B, T, Y... | MAGNESIUM ION | non-polymer | 24.3 | 93 | Chemie (MG) | |||
33 | 0, O, Q, A, R... | CHLORIDE ION | non-polymer | 35.5 | 22 | Chemie (CL) | |||
34 | 0, A, R, S, B... | STRONTIUM ION | non-polymer | 87.6 | 108 | Chemie (SR) | |||
35 | 0, Q, R, S, B... | SODIUM ION | non-polymer | 23.0 | 75 | Chemie (NA) | |||
36 | O, U, Z, 1, 3 | CADMIUM ION | non-polymer | 112.4 | 5 | Chemie (CD) | |||
37 | 0 | POTASSIUM ION | non-polymer | 39.1 | 2 | Chemie (K) | |||
38 | water | water | 18.0 | 7823 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 31 |
Total formula weight | 1478358.0 | |
Non-Polymers* | Number of molecules | 305 |
Total formula weight | 14867.8 | |
All* | Total formula weight | 1493225.8 |