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2ZCE

Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with pyrrolysine and an ATP analogue

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1APyrrolysyl-tRNA synthetasepolymer29133344.21UniProt (Q8PWY1)
Pfam (PF01409)
In PDB
Methanosarcina mazeiPyrrolysine--tRNA ligase, PylRS
2AMAGNESIUM IONnon-polymer24.32Chemie (MG)
3APYRROLYSINEnon-polymer255.31Chemie (PYL)
4APHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERnon-polymer506.21Chemie (ANP)
5waterwater18.0224Chemie (HOH)
Sequence modifications
A: 185 - 454 (UniProt: Q8PWY1)
PDBExternal DatabaseDetails
Met -21-expression tag
Gly -20-expression tag
Ser -19-expression tag
Ser -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
Ser -11-expression tag
Ser -10-expression tag
Gly -9-expression tag
Leu -8-expression tag
Val -7-expression tag
Pro -6-expression tag
Arg -5-expression tag
Gly -4-expression tag
Ser -3-expression tag
His -2-expression tag
Met -1-expression tag
Gly 444Glu 444SEE REMARK 999
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight33344.2
Non-Polymers*Number of molecules4
Total formula weight810.1
All*Total formula weight34154.3
*Water molecules are not included.

220113

PDB entries from 2024-05-22

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