2FBJ
REFINED CRYSTAL STRUCTURE OF THE GALACTAN-BINDING IMMUNOGLOBULIN FAB J539 AT 1.95-ANGSTROMS RESOLUTION
Replaces: 1FBJEntity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | L | IGA-KAPPA J539 FAB (LIGHT CHAIN) | polymer | 213 | 23282.8 | 1 | GenBank (437099) Pfam (PF07686) UniProt (by SIFTS) (P01679) In PDB | Mus musculus (mouse) | |
| 2 | H | IGA-KAPPA J539 FAB (HEAVY CHAIN) | polymer | 220 | 23949.0 | 1 | UniProt (P01810) Pfam (PF07686) In PDB | Mus musculus (mouse) | |
| 3 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 4 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G21290RB) | |||
| 5 | H | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 6 | water | water | 18.0 | 375 | Chemie (HOH) |
Sequence modifications
L: 1 - 212 (GenBank: 437099)
| PDB | External Database | Details |
|---|---|---|
| Ile 2 | Leu 2 | conflict |
| Thr 11 | Met 11 | conflict |
| Ala 12 | Ser 12 | conflict |
| Leu 15 | Pro 15 | conflict |
| - | Arg 32 | deletion |
| - | Phe 33 | deletion |
| Thr 41 | Ala 43 | conflict |
| Pro 45 | Leu 47 | conflict |
| Glu 49 | Asp 51 | conflict |
| Ile 50 | Thr 52 | conflict |
| Ser 55 | Pro 57 | conflict |
| Asn 75 | Ser 77 | conflict |
| Thr 76 | Ser 78 | conflict |
| Ile 84 | Ser 86 | conflict |
| Tyr 86 | Phe 88 | conflict |
| Gln 88 | His 90 | conflict |
| - | Ser 93 | deletion |
| Thr 91 | Ser 94 | conflict |
| Ile 95 | - | insertion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 47231.8 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 994.9 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 65.4 | |
| All* | Total formula weight | 48292.1 |
