2F8N
2.9 Angstrom X-ray structure of hybrid macroH2A nucleosomes
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | I, J | alpha-satellite DNA (146 bp) | polymer | 146 | 45054.8 | 2 | Homo sapiens (human) | ||
2 | A, E | Histone H3.1 | polymer | 136 | 15421.1 | 2 | UniProt (P84233) Pfam (PF00125) In PDB | Xenopus laevis (African clawed frog) | |
3 | B, F | Histone H4 | polymer | 103 | 11394.4 | 2 | UniProt (P62799) Pfam (PF15511) In PDB | Xenopus laevis (African clawed frog) | |
4 | D | Histone 3, H2ba | polymer | 126 | 14025.3 | 1 | UniProt (Q9D2U9) Pfam (PF00125) In PDB | Mus musculus (house mouse) | |
5 | H | Histone H2B.1 | polymer | 123 | 13655.9 | 1 | UniProt (P02281) Pfam (PF00125) In PDB | Xenopus laevis (African clawed frog) | |
6 | G | Core histone macro-H2A.1 | polymer | 120 | 12984.3 | 1 | UniProt (O75367) Pfam (PF00125) Pfam (PF16211) In PDB | Homo sapiens (human) | |
7 | K | Histone H2A type 1 | polymer | 149 | 16198.8 | 1 | UniProt (Q8CGP6) Pfam (PF00125) Pfam (PF16211) In PDB | Mus musculus (house mouse) | |
8 | water | water | 18.0 | 120 | Chemie (HOH) |
Sequence modifications
H: 1401 - 1522 (UniProt: P02281)
G: 1003 - 1122 (UniProt: O75367)
K: 0 - 129 (UniProt: Q8CGP6)
PDB | External Database | Details |
---|---|---|
Met 1400 | - | initiating methionine |
Thr 1429 | Ser 32 | conflict |
PDB | External Database | Details |
---|---|---|
Val 1067 | Gly 64 | conflict |
PDB | External Database | Details |
---|---|---|
Met -19 | - | cloning artifact |
Gly -18 | - | cloning artifact |
Ser -17 | - | cloning artifact |
Ser -16 | - | cloning artifact |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
Ser -9 | - | cloning artifact |
Ser -8 | - | cloning artifact |
Gly -7 | - | cloning artifact |
Leu -6 | - | cloning artifact |
Val -5 | - | cloning artifact |
Pro -4 | - | cloning artifact |
Arg -3 | - | cloning artifact |
Gly -2 | - | cloning artifact |
Ser -1 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 200605.1 | |
All* | Total formula weight | 200605.1 |