Mine: PDB keyword search results

1K6F
  • Download 1k6f
  • View 1k6f
1k6f
CRYSTAL STRUCTURE OF THE COLLAGEN TRIPLE HELIX MODEL [(PRO-PRO-GLY)10]3
Descriptor:polypeptide model for the collagen triple helix
Authors:Berisio, R., Vitagliano, L., Mazzarella, L., Zagari, A
Deposit date:2001-10-16
Release date:2002-01-30
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the collagen triple helix model [(Pro-Pro-Gly)(10)](3)
Protein Sci., 11, 2002
1QSU
  • Download 1qsu
  • View 1qsu
1qsu
CRYSTAL STRUCTURE OF THE TRIPLE-HELICAL COLLAGEN-LIKE PEPTIDE, (PRO-HYP-GLY)4-GLU-LYS-GLY(PRO-HYP-GLY)5
Descriptor:PROTEIN (PRO-HYP-GLY)4- GLU-LYS-GLY(PRO-HYP-GLY)5 )
Authors:Kramer, R.Z., Venugopal, M., Bella, J., Brodsky, B., Berman, H.M.
Deposit date:1999-06-23
Release date:2000-08-30
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Staggered molecular packing in crystals of a collagen-like peptide with a single charged pair.
J.Mol.Biol., 301, 2000
1SOP
  • Download 1sop
  • View 1sop
1sop
C-TERMINAL CYSTINE-RICH DOMAIN OF MINICOLLAGEN-I FROM HYDRA
Descriptor:mini-collagen
Authors:Milbradt, A.G., Moroder, L., Renner, C.
Deposit date:2004-03-15
Release date:2004-04-27
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:The structure of the Cys-rich terminal domain of Hydra minicollagen, which is involved in disulfide networks of the nematocyst wall.
J.Biol.Chem., 279, 2004
1SP7
  • Download 1sp7
  • View 1sp7
1sp7
STRUCTURE OF THE CYS-RICH C-TERMINAL DOMAIN OF HYDRA MINICOLLAGEN
Descriptor:mini-collagen
Authors:Meier, S., Haussinger, D., Pokidysheva, E., Bachinger, H.P., Grzesiek, S.
Deposit date:2004-03-16
Release date:2004-05-18
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Determination of a high-precision NMR structure of the minicollagen cysteine rich domain from Hydra and characterization of its disulfide bond formation.
Febs Lett., 569, 2004
1WZB
  • Download 1wzb
  • View 1wzb
1wzb
CRYSTAL STRUCTURE OF THE COLLAGEN TRIPLE HELIX MODEL [{HYP(R)-HYP(R)-GLY}10]3
Descriptor:Collagen triple helix
Authors:Kawahara, K., Nakamura, S., Nishi, Y., Uchiyama, S., Nishiuchi, Y., Nakazawa, T., Ohkubo, T., Kobayashi, Y.
Deposit date:2005-03-03
Release date:2006-01-31
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Effect of hydration on the stability of the collagen-like triple-helical structure of [4(R)-hydroxyprolyl-4(R)-hydroxyprolylglycine]10
Biochemistry, 44, 2005
2CUO
  • Download 2cuo
  • View 2cuo
2cuo
COLLAGEN MODEL PEPTIDE (PRO-PRO-GLY)9
Descriptor:COLLAGEN MODEL PEPTIDE (PRO-PRO-GLY)9
Authors:Hongo, C., Noguchi, K., Okuyama, K., Tanaka, Y., Nishino, N.
Deposit date:2005-05-27
Release date:2005-06-14
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Repetitive interactions observed in the crystal structure of a collagen-model peptide, [(Pro-Pro-Gly)9]3
J.Biochem.(Tokyo), 138, 2005
2DRT
  • Download 2drt
  • View 2drt
2drt
STRUCTURE ANALYSIS OF (POG)4-LOG-(POG)5
Descriptor:collagen like peptide
Authors:Okuyama, K.
Deposit date:2006-06-14
Release date:2007-04-24
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Unique side chain conformation of a leu residue in a triple-helical structure
Biopolymers, 86, 2007
2DRX
  • Download 2drx
  • View 2drx
2drx
STRUCTURE ANALYSIS OF (POG)4-(LOG)2-(POG)4
Descriptor:collagen like peptide
Authors:Okuyama, K.
Deposit date:2006-06-16
Release date:2007-04-24
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Unique side chain conformation of a leu residue in a triple-helical structure
Biopolymers, 86, 2007
2G66
  • Download 2g66
  • View 2g66
2g66
CRYSTAL STRUCTURE OF A COLLAGEN-LIKE PEPTIDE WITH 3(S)HYP IN THE XAA POSITION
Descriptor:collagen
Authors:Schumacher, M.A., Mizuno, K., Bachinger, H.P.
Deposit date:2006-02-24
Release date:2006-08-08
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Crystal Structure of a Collagen-like Polypeptide with 3(S)-Hydroxyproline Residues in the Xaa Position Forms a Standard 7/2 Collagen Triple Helix
J.Biol.Chem., 281, 2006
2R6Q
  • Download 2r6q
  • View 2r6q
2r6q
CRYSTAL STRUCTURE OF BCLA-ISLAND CONSTRUCT
Descriptor:Crystal Structure of BclA-island Construct
Authors:Han, B.W., Herrin, B.R., Turnbough Jr., C.L., Cooper, M.D., Wilson, I.A.
Deposit date:2007-09-06
Release date:2009-03-10
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Crystal structure of BclA-island Construct
To be Published
2Z5W
  • Download 2z5w
  • View 2z5w
2z5w
TBCLA, A RECOMBINANT SPORE SURFACE PROTEIN FROM BACILLUS ANTHRACIS
Descriptor:BclA protein
Authors:Streltsov, V.A.
Deposit date:2007-07-20
Release date:2008-04-22
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Construction, crystal structure and application of a recombinant protein that lacks the collagen-like region of BclA from Bacillus anthracis spores.
BIOTECHNOL.BIOENG., 99, 2008
3AI6
  • Download 3ai6
  • View 3ai6
3ai6
TRIPLE-HELICAL STRUCTURE OF (D-PRO-D-PRO-GLY)9 AT 1.1 A RESOLUTION
Descriptor:collagen-like peptide
Authors:Okuyama, K., Miyama, K., Kawaguchi, T., Nishino, N.
Deposit date:2010-05-10
Release date:2011-04-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Triple-helical structure of (D-Pro-D-Pro-Gly)9
To be Published
4DMT
  • Download 4dmt
  • View 4dmt
4dmt
CRYSTAL STRUCTURE OF A VWF BINDING COLLAGEN III DERIVED TRIPLE HELICAL PEPTIDE
Descriptor:Collagen III derived peptide
Authors:Brondijk, T.H.C., Huizinga, E.G.
Deposit date:2012-02-08
Release date:2012-03-28
Modification date:2012-04-18
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Implications for collagen I chain registry from the structure of the collagen von Willebrand factor A3 domain complex.
Proc.Natl.Acad.Sci.USA, 109, 2012
4NSM
  • Download 4nsm
  • View 4nsm
4nsm
CRYSTAL STRUCTURE OF THE STREPTOCOCCAL COLLAGEN-LIKE PROTEIN 2 GLOBULAR DOMAIN FROM INVASIVE M3-TYPE GROUP A STREPTOCOCCUS
Descriptor:Collagen-like protein SclB
Authors:Berisio, R., Squeglia, F., Lukomski, S., Bachert, B.
Deposit date:2013-11-28
Release date:2013-12-25
Modification date:2014-03-12
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Crystal Structure of the Streptococcal Collagen-like Protein 2 Globular Domain from Invasive M3-type Group A Streptococcus Shows Significant Similarity to Immunomodulatory HIV Protein gp41.
J.Biol.Chem., 289, 2014
1NAY
  • Download 1nay
  • View 1nay
1nay
GPP-FOLDON:X-RAY STRUCTURE
Descriptor:Collagen-like peptide
Authors:Stetefeld, J.
Deposit date:2002-11-29
Release date:2003-03-25
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Collagen Stabilization at Atomic Level. Crystal Structure of Designed (GlyProPro)(10)foldon
Structure, 11, 2003
1BKV
  • Download 1bkv
  • View 1bkv
1bkv
COLLAGEN
Descriptor:T3-785
Authors:Kramer, R.Z., Bella, J., Mayville, P., Brodsky, B., Berman, H.M.
Deposit date:1998-07-13
Release date:1999-02-16
Modification date:2010-12-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Sequence dependent conformational variations of collagen triple-helical structure.
Nat.Struct.Biol., 6, 1999
1WCK
  • Download 1wck
  • View 1wck
1wck
CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF BCLA, THE MAJOR ANTIGEN OF THE EXOSPORIUM OF THE BACILLUS ANTHRACIS SPORE.
Descriptor:BCLA PROTEIN
Authors:Rety, S., Salamitou, S., Augusto, L.A., Chaby, R., Lehegarat, F., Lewit-Bentley, A.
Deposit date:2004-11-17
Release date:2005-10-25
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:The Crystal Structure of the Bacillus Anthracis Spore Surface Protein Bcla Shows Remarkable Similarity to Mammalian Proteins.
J.Biol.Chem., 280, 2005
1YM8
  • Download 1ym8
  • View 1ym8
1ym8
CRYSTAL STRUCTURE OF GZZ SHOWS UP PUCKERING OF THE PROLINE RING IN THE XAA POSITION.
Descriptor:collagen gly-4(R)hyp-4(R)hyp
Authors:Schumacher, M.A., Mizuno, K., Bachinger, H.P.
Deposit date:2005-01-20
Release date:2005-04-19
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The crystal structure of the collagen-like polypeptide (glycyl-4(R)-hydroxyprolyl-4(R)-hydroxyprolyl)9 at 1.55 A resolution shows up-puckering of the proline ring in the Xaa position.
J.Biol.Chem., 280, 2005
2D3F
  • Download 2d3f
  • View 2d3f
2d3f
CRYSTAL STRUCTURES OF COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-PRO-HYP-GLY-(PRO-PRO-GLY)4
Descriptor:COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-PRO-HYP-GLY-(PRO-PRO-GLY)4
Authors:Wu, G., Noguchi, K., Okuyama, K., Ebisuzaki, S., Nishino, N.
Deposit date:2005-09-27
Release date:2006-09-19
Modification date:2009-03-24
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:High-resolution structures of collagen-like peptides [(Pro-Pro-Gly)(4)-Xaa-Yaa-Gly-(Pro-Pro-Gly)(4)]: Implications for triple-helix hydration and Hyp(X) puckering.
Biopolymers, 91, 2009
2D3H
  • Download 2d3h
  • View 2d3h
2d3h
CRYSTAL STRUCTURES OF COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-HYP-HYP-GLY-(PRO-PRO-GLY)4
Descriptor:COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-HYP-HYP-GLY-(PRO-PRO-GLY)4
Authors:Wu, G., Noguchi, K., Okuyama, K., Mizuno, K., Bachinger, H.P.
Deposit date:2005-09-28
Release date:2006-09-19
Modification date:2009-03-24
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:High-resolution structures of collagen-like peptides [(Pro-Pro-Gly)(4)-Xaa-Yaa-Gly-(Pro-Pro-Gly)(4)]: Implications for triple-helix hydration and Hyp(X) puckering.
Biopolymers, 91, 2009
2LLP
  • Download 2llp
  • View 2llp
2llp
SOLUTION STRUCTURE OF A THP TYPE 1 ALPHA 1 COLLAGEN FRAGMENT (772-786)
Descriptor:Collagen alpha-1(I) chain
Authors:Bertini, I., Fragai, M., Luchinat, C., Melikian, M., Toccafondi, M., Lauer, J.L., Fields, G.B.
Deposit date:2011-11-15
Release date:2012-05-30
Method:SOLUTION NMR
Cite:Structural basis for matrix metalloproteinase 1-catalyzed collagenolysis.
J.Am.Chem.Soc., 134, 2012
2UUR
  • Download 2uur
  • View 2uur
2uur
N-TERMINAL NC4 DOMAIN OF COLLAGEN IX
Descriptor:COLLAGEN ALPHA-1(IX) CHAIN
Authors:Leppanen, V.-M., Tossavainen, H., Permi, P., Lehtio, L., Ronnholm, G., Goldman, A., Kilpelainen, I., Pihlajamaa, T.
Deposit date:2007-03-07
Release date:2007-06-05
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the N-Terminal Nc4 Domain of Collagen Ix, a Zinc Binding Member of the Laminin-Neurexin-Sex Hormone Binding Globulin (Lns) Domain Family.
J.Biol.Chem., 282, 2007
3AH9
  • Download 3ah9
  • View 3ah9
3ah9
CRYSTAL STRUCTURE OF (PRO-PRO-GLY)9 AT 1.1 A RESOLUTION
Descriptor:collagen-like peptide
Authors:Okuyama, K., Morimoto, T., Hongo, C., Hosaka, N., Nishino, N.
Deposit date:2010-04-22
Release date:2011-04-06
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Crystal structure of (Pro-Pro-Gly)9
To be Published
3B0S
  • Download 3b0s
  • View 3b0s
3b0s
CRYSTAL STRUCTURE OF (GLY-PRO-HYP)9
Descriptor:collagen-like peptide
Authors:Okuyama, K., Miyama, K., Mizuno, K., Bachinger, H.P.
Deposit date:2011-06-14
Release date:2012-05-30
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of (Gly-Pro-Hyp)(9) : Implications for the collagen molecular model.
Biopolymers, 97, 2012
3B2C
  • Download 3b2c
  • View 3b2c
3b2c
CRYSTAL STRUCTURE OF THE COLLAGEN TRIPLE HELIX MODEL [{PRO-HYP(R)-GLY}4-{HYP(S)-PRO-GLY}2-{PRO-HYP(R)-GLY}4]3
Descriptor:Collagen-like peptide
Authors:Motooka, D., Kawahara, K., Nakamura, S., Doi, M., Nishi, Y., Nishiuchi, Y., Nakazawa, T., Yoshida, T., Ohkubo, T., Kobayashi, Y., Kang, Y.K., Uchiyama, S.
Deposit date:2011-07-26
Release date:2012-04-04
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:The triple helical structure and stability of collagen model peptide with 4(S)-hydroxyprolyl-pro-gly units
Biopolymers, 98, 2011
Copyright © 2013-2014 Protein Data Bank Japan
This is the static version of the PDBj web interface with limited functionality. Try the full version instead.
  • Everything
  • PDBID/Keywords
  • Author
  • Chemie
  • Sequence
  • ?
105097
entries available on 2014-12-17
00:00 UTC / 09:00 JST