Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5GUA
DownloadVisualize
BU of 5gua by Molmil
Structure of biotin carboxyl carrier protein from pyrococcus horikoshi OT3 (delta N79) A138Y mutant
Descriptor: 149aa long hypothetical methylmalonyl-CoA decarboxylase gamma chain
Authors:Yamada, K, Kunishima, N, Matsuura, Y, Nakai, K, Naitow, H, Fukasawa, Y, Tomii, K.
Deposit date:2016-08-26
Release date:2017-08-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Designing better diffracting crystals of biotin carboxyl carrier protein from Pyrococcus horikoshii by a mutation based on the crystal-packing propensity of amino acids.
Acta Crystallogr D Struct Biol, 73, 2017
2JKU
DownloadVisualize
BU of 2jku by Molmil
Crystal structure of the N-terminal region of the biotin acceptor domain of human propionyl-CoA carboxylase
Descriptor: PROPIONYL-COA CARBOXYLASE ALPHA CHAIN, MITOCHONDRIAL, TETRAETHYLENE GLYCOL
Authors:Healy, S, Yue, W.W, Kochan, G, Pilka, E.S, Murray, J.W, Roos, A.K, Filippakopoulos, P, von Delft, F, Arrowsmith, C, Wikstrom, M, Edwards, A, Bountra, C, Gravel, R.A, Oppermann, U.
Deposit date:2008-08-30
Release date:2008-09-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural impact of human and Escherichia coli biotin carboxyl carrier proteins on biotin attachment.
Biochemistry, 49, 2010
2EVB
DownloadVisualize
BU of 2evb by Molmil
Structure of Biotin Carboxyl Carrier Protein (74Val start) from Pyrococcus horikoshi OT3 Ligand Free Form I
Descriptor: methylmalonyl-CoA decarboxylase gamma chain
Authors:Bagautdinov, B, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-10-31
Release date:2006-05-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Protein biotinylation visualized by a complex structure of biotin protein ligase with a substrate
J.Biol.Chem., 283, 2008
2D5D
DownloadVisualize
BU of 2d5d by Molmil
Structure of Biotin Carboxyl Carrier Protein (74Val start) from Pyrococcus horikoshi OT3 Ligand Free Form II
Descriptor: methylmalonyl-CoA decarboxylase gamma chain
Authors:Bagautdinov, B, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-11-01
Release date:2006-05-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Protein biotinylation visualized by a complex structure of biotin protein ligase with a substrate
J.Biol.Chem., 283, 2008
5GU8
DownloadVisualize
BU of 5gu8 by Molmil
Structure of biotin carboxyl carrier protein from pyrococcus horikoshi OT3 (delta N79) wild type
Descriptor: 149aa long hypothetical methylmalonyl-CoA decarboxylase gamma chain, SODIUM ION
Authors:Yamada, K, Kunishima, N, Matsuura, Y, Nakai, K, Naitow, H, Fukasawa, Y, Tomii, K.
Deposit date:2016-08-26
Release date:2017-08-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Designing better diffracting crystals of biotin carboxyl carrier protein from Pyrococcus horikoshii by a mutation based on the crystal-packing propensity of amino acids.
Acta Crystallogr D Struct Biol, 73, 2017
1BDO
DownloadVisualize
BU of 1bdo by Molmil
STRUCTURE OF THE BIOTINYL DOMAIN OF ACETYL-COENZYME A CARBOXYLASE DETERMINED BY MAD PHASING
Descriptor: ACETYL-COA CARBOXYLASE, BIOTIN
Authors:Athappilly, F.K, Hendrickson, W.A.
Deposit date:1995-11-21
Release date:1996-08-01
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the biotinyl domain of acetyl-coenzyme A carboxylase determined by MAD phasing.
Structure, 3, 1995
5GU9
DownloadVisualize
BU of 5gu9 by Molmil
Structure of biotin carboxyl carrier protein from pyrococcus horikoshi OT3 (delta N79) A138I mutant
Descriptor: 149aa long hypothetical methylmalonyl-CoA decarboxylase gamma chain
Authors:Yamada, K, Kunishima, N, Matsuura, Y, Nakai, K, Naitow, H, Fukasawa, Y, Tomii, K.
Deposit date:2016-08-26
Release date:2017-08-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Designing better diffracting crystals of biotin carboxyl carrier protein from Pyrococcus horikoshii by a mutation based on the crystal-packing propensity of amino acids.
Acta Crystallogr D Struct Biol, 73, 2017
5MLK
DownloadVisualize
BU of 5mlk by Molmil
Biotin dependent carboxylase AccA3 dimer from Mycobacterium tuberculosis (Rv3285)
Descriptor: Acetyl-COA carboxylase
Authors:Bennett, M.D, Hogbom, M.
Deposit date:2016-12-07
Release date:2017-03-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.939 Å)
Cite:Crystal structure of the essential biotin-dependent carboxylase AccA3 from Mycobacterium tuberculosis.
FEBS Open Bio, 7, 2017
6YBQ
DownloadVisualize
BU of 6ybq by Molmil
Engineered glycolyl-CoA carboxylase (quintuple mutant) with bound CoA
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, COENZYME A, Propionyl-CoA carboxylase alpha subunit, ...
Authors:Schuller, J.M, Schuller, S.K, Zarzycki, J, Scheffen, M, Marchal, D.M, Erb, T.J.
Deposit date:2020-03-17
Release date:2020-10-28
Last modified:2021-05-12
Method:ELECTRON MICROSCOPY (1.96 Å)
Cite:A new-to-nature carboxylation module to improve natural and synthetic CO2 fixation
Nat Catal, 2021
2QF7
DownloadVisualize
BU of 2qf7 by Molmil
Crystal structure of a complete multifunctional pyruvate carboxylase from Rhizobium etli
Descriptor: CHLORIDE ION, COENZYME A, FORMIC ACID, ...
Authors:St Maurice, M, Surinya, K.H, Rayment, I.
Deposit date:2007-06-27
Release date:2007-09-04
Last modified:2012-02-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Domain architecture of pyruvate carboxylase, a biotin-dependent multifunctional enzyme
Science, 317, 2007
2EJF
DownloadVisualize
BU of 2ejf by Molmil
Crystal Structure Of The Biotin Protein Ligase (Mutations R48A and K111A) and Biotin Carboxyl Carrier Protein Complex From Pyrococcus Horikoshii OT3
Descriptor: 149aa long hypothetical methylmalonyl-CoA decarboxylase gamma chain, 235aa long hypothetical biotin--[acetyl-CoA-carboxylase] ligase, ADENOSINE, ...
Authors:Bagautdinov, B, Matsuura, Y, Bagautdinova, S, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-16
Release date:2008-03-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Protein biotinylation visualized by a complex structure of biotin protein ligase with a substrate
J.Biol.Chem., 283, 2008
8PN7
DownloadVisualize
BU of 8pn7 by Molmil
Engineered glycolyl-CoA carboxylase (G20R variant) with bound CoA
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, COENZYME A, Propionyl-CoA carboxylase alpha subunit, ...
Authors:Zarzycki, J, Marchal, D.G, Schulz, L, Prinz, S, Erb, T.J.
Deposit date:2023-06-30
Release date:2023-11-29
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.03 Å)
Cite:Machine Learning-Supported Enzyme Engineering toward Improved CO 2 -Fixation of Glycolyl-CoA Carboxylase.
Acs Synth Biol, 12, 2023
7YBU
DownloadVisualize
BU of 7ybu by Molmil
Human propionyl-coenzyme A carboxylase
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Propionyl-CoA carboxylase alpha chain, mitochondrial, ...
Authors:Su, J.Y, Liu, D.S.
Deposit date:2022-06-29
Release date:2023-07-05
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Human propionyl-coenzyme A carboxylase
To Be Published
3CRK
DownloadVisualize
BU of 3crk by Molmil
Crystal structure of the PDHK2-L2 complex.
Descriptor: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial, POTASSIUM ION, ...
Authors:Green, T.J, Popov, K.M, Luo, M, Grigorian, A, Klyuyeva, A, Tuganova, A.
Deposit date:2008-04-07
Release date:2008-04-29
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional insights into the molecular mechanisms responsible for the regulation of pyruvate dehydrogenase kinase 2.
J.Biol.Chem., 283, 2008
8PN8
DownloadVisualize
BU of 8pn8 by Molmil
Engineered glycolyl-CoA carboxylase (L100N variant) with bound CoA
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, COENZYME A, Propionyl-CoA carboxylase alpha subunit, ...
Authors:Zarzycki, J, Marchal, D.G, Schulz, L, Prinz, S, Erb, T.J.
Deposit date:2023-06-30
Release date:2023-11-29
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:Machine Learning-Supported Enzyme Engineering toward Improved CO 2 -Fixation of Glycolyl-CoA Carboxylase.
Acs Synth Biol, 12, 2023
3DVA
DownloadVisualize
BU of 3dva by Molmil
Snapshots of catalysis in the E1 subunit of the pyruvate dehydrogenase multi-enzyme complex
Descriptor: 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, MAGNESIUM ION, ...
Authors:Pei, X.Y, Titman, C.M, Frank, R.A.W, Leeper, F.J, Luisi, B.F.
Deposit date:2008-07-18
Release date:2009-01-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Snapshots of catalysis in the e1 subunit of the pyruvate dehydrogenase multienzyme complex
Structure, 16, 2008
8RTH
DownloadVisualize
BU of 8rth by Molmil
Trypanosoma brucei 3-methylcrotonyl-CoA carboxylase
Descriptor: 3-methylcrotonyl-CoA carboxylase, putative, 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, ...
Authors:Ruiz, F.M, Plaza-Pegueroles, A, Fernandez-Tornero, C.
Deposit date:2024-01-26
Release date:2024-04-17
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.37 Å)
Cite:The cryo-EM structure of trypanosome 3-methylcrotonyl-CoA carboxylase provides mechanistic and dynamic insights into its enzymatic function.
Structure, 32, 2024
3TW6
DownloadVisualize
BU of 3tw6 by Molmil
Structure of Rhizobium etli pyruvate carboxylase T882A with the allosteric activator, acetyl coenzyme-A
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:St Maurice, M, Kumar, S, Lietzan, A.D.
Deposit date:2011-09-21
Release date:2011-10-19
Last modified:2011-12-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Interaction between the biotin carboxyl carrier domain and the biotin carboxylase domain in pyruvate carboxylase from Rhizobium etli.
Biochemistry, 50, 2011
1Y8O
DownloadVisualize
BU of 1y8o by Molmil
Crystal structure of the PDK3-L2 complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DIHYDROLIPOIC ACID, Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, ...
Authors:Kato, M, Chuang, J.L, Wynn, R.M, Chuang, D.T.
Deposit date:2004-12-13
Release date:2005-05-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Crystal structure of pyruvate dehydrogenase kinase 3 bound to lipoyl domain 2 of human pyruvate dehydrogenase complex.
Embo J., 24, 2005
4HR7
DownloadVisualize
BU of 4hr7 by Molmil
Crystal Structure of Biotin Carboxyl Carrier Protein-Biotin Carboxylase Complex from E.coli
Descriptor: 1,2-ETHANEDIOL, Biotin carboxyl carrier protein of acetyl-CoA carboxylase, Biotin carboxylase, ...
Authors:Broussard, T.C, Kobe, M.J, Pakhomova, S, Neau, D.B, Price, A.E, Champion, T.S, Waldrop, G.L.
Deposit date:2012-10-26
Release date:2013-03-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:The three-dimensional structure of the biotin carboxylase-biotin carboxyl carrier protein complex of E. coli acetyl-CoA carboxylase.
Structure, 21, 2013
3DUF
DownloadVisualize
BU of 3duf by Molmil
Snapshots of catalysis in the E1 subunit of the pyruvate dehydrogenase multi-enzyme complex
Descriptor: 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-[(1R)-1-HYDROXYETHYL]-3-METHYL-2-THIENYL}ETHYL TRIHYDROGEN DIPHOSPHATE, Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, MAGNESIUM ION, ...
Authors:Pei, X.Y, Titman, C.M, Frank, R.A.W, Leeper, F.J, Luisi, B.F.
Deposit date:2008-07-17
Release date:2009-01-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Snapshots of catalysis in the e1 subunit of the pyruvate dehydrogenase multienzyme complex
Structure, 16, 2008
3DV0
DownloadVisualize
BU of 3dv0 by Molmil
Snapshots of catalysis in the E1 subunit of the pyruvate dehydrogenase multi-enzyme complex
Descriptor: 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, MAGNESIUM ION, ...
Authors:Pei, X.Y, Titman, C.M, Frank, R.A.W, Leeper, F.J, Luisi, B.F.
Deposit date:2008-07-18
Release date:2009-01-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Snapshots of catalysis in the e1 subunit of the pyruvate dehydrogenase multienzyme complex
Structure, 16, 2008
2PNR
DownloadVisualize
BU of 2pnr by Molmil
Crystal Structure of the asymmetric Pdk3-l2 Complex
Descriptor: DIHYDROLIPOIC ACID, Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3
Authors:Vassylyev, D.G, Steussy, C.N, Devedjiev, Y.
Deposit date:2007-04-25
Release date:2007-08-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of an Asymmetric complex of Pyruvate Dehydrogenase Kinase 3 with Lipoyl domain 2 and its Biological Implications
J.Mol.Biol., 370, 2007
8JAW
DownloadVisualize
BU of 8jaw by Molmil
Human MCC in MCCD state
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial, ...
Authors:Liu, D.S, Su, J.Y, Tian, X.Y.
Deposit date:2023-05-07
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:Human MCC in BCCP-CTS state
To Be Published
8JAK
DownloadVisualize
BU of 8jak by Molmil
Human MCC in MCCU state
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial, ...
Authors:Liu, D.S, Su, J.Y, Tian, X.Y.
Deposit date:2023-05-06
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:Human MCC in BCCP-BCS state
To Be Published

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon