Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8XY7
DownloadVisualize
BU of 8xy7 by Molmil
hPhK alpha-gamma subcomplex in active state
Descriptor: FARNESYL, Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform, ...
Authors:Yang, X.K, Xiao, J.Y.
Deposit date:2024-01-19
Release date:2024-04-03
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Architecture and activation of human muscle phosphorylase kinase.
Nat Commun, 15, 2024
8XYB
DownloadVisualize
BU of 8xyb by Molmil
hPhK gamma-delta subcomplex in inactive state
Descriptor: Calmodulin-1, FARNESYL, Phosphorylase b kinase gamma catalytic chain, ...
Authors:Yang, X.K, Xiao, J.Y.
Deposit date:2024-01-19
Release date:2024-04-03
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Architecture and activation of human muscle phosphorylase kinase.
Nat Commun, 15, 2024
8XYA
DownloadVisualize
BU of 8xya by Molmil
hPhK alpha-beta-gamma-delta subcomplex in inactive state
Descriptor: Calmodulin-1, FARNESYL, Phosphorylase b kinase gamma catalytic chain, ...
Authors:Yang, X.K, Xiao, J.Y.
Deposit date:2024-01-19
Release date:2024-04-03
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Architecture and activation of human muscle phosphorylase kinase.
Nat Commun, 15, 2024
8JFL
DownloadVisualize
BU of 8jfl by Molmil
PhK holoenzyme in active state, muscle isoform
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FARNESYL, Phosphorylase b kinase gamma catalytic chain, ...
Authors:Yang, X.K, Xiao, J.Y.
Deposit date:2023-05-18
Release date:2024-04-03
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Architecture and activation of human muscle phosphorylase kinase.
Nat Commun, 15, 2024
8JFK
DownloadVisualize
BU of 8jfk by Molmil
PhK holoenzyme in inactive state, muscle isoform
Descriptor: Calmodulin-1, FARNESYL, Phosphorylase b kinase gamma catalytic chain, ...
Authors:Yang, X.K, Xiao, J.Y.
Deposit date:2023-05-18
Release date:2024-04-03
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Architecture and activation of human muscle phosphorylase kinase.
Nat Commun, 15, 2024
8K20
DownloadVisualize
BU of 8k20 by Molmil
Cryo-EM structure of KEOPS complex from Arabidopsis thaliana
Descriptor: At4g34412, At5g53043, FE (III) ION, ...
Authors:Zheng, X.X, Zhu, L, Duan, L, Zhang, W.H.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Molecular basis of A. thaliana KEOPS complex in biosynthesizing tRNA t6A.
Nucleic Acids Res., 2024
8QGY
DownloadVisualize
BU of 8qgy by Molmil
Cryo-EM structure of C-terminally truncated Apoptosis signal-regulating kinase 1 (ASK1)
Descriptor: Mitogen-activated protein kinase kinase kinase 5
Authors:Kosek, D, Honzejkova, K, Obsilova, V, Obsil, T.
Deposit date:2023-09-06
Release date:2024-04-03
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:The cryo-EM structure of ASK1 reveals an asymmetric architecture allosterically modulated by TRX1.
Elife, 13, 2024
8USO
DownloadVisualize
BU of 8uso by Molmil
Full-length human CaMKII delta holoenzyme
Descriptor: MALONATE ION, calcium/calmodulin-dependent protein kinase
Authors:Ozden, C, Abromson, N.L, Tomchick, D.R, Stratton, M.M, Garman, S.C.
Deposit date:2023-10-28
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Full-length human CaMKII delta holoenzyme
To be published
8SV9
DownloadVisualize
BU of 8sv9 by Molmil
Crystal structure of ULK1 kinase domain with inhibitor MR-2088
Descriptor: (4P)-4-[(2P)-2-(1,2,5,6-tetrahydropyridin-3-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]-N-(2,2,2-trifluoroethyl)thiophene-2-carboxamide, 1,2-ETHANEDIOL, SULFATE ION, ...
Authors:Schonbrunn, E, Sun, L.
Deposit date:2023-05-15
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Development of potent and selective ULK1/2 inhibitors based on 7-azaindole scaffold with favorable in vivo properties.
Eur.J.Med.Chem., 266, 2024
8R4Q
DownloadVisualize
BU of 8r4q by Molmil
Salt inducible kinase 3 in complex with inhibitor
Descriptor: 4-[(2,4-dichloro-5-methoxyphenyl)amino]-6-methoxy-7-[3-(4-methylpiperazin-1-yl)propoxy]quinoline-3-carbonitrile, SULFATE ION, Serine/threonine-protein kinase SIK3, ...
Authors:Kack, H, Oster, L.
Deposit date:2023-11-14
Release date:2024-03-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.838 Å)
Cite:The structures of salt inducible kinase 3 in complex with pharmacological inhibitors reveal determinants for binding and selectivity.
J.Biol.Chem., 2024
8R4V
DownloadVisualize
BU of 8r4v by Molmil
Structure of Salt-inducible kinase 3 in complex with inhibitor
Descriptor: 1-(2,4-dimethoxyphenyl)-3-(2,6-dimethylphenyl)-1-[6-[[4-(4-methylpiperazin-1-yl)phenyl]amino]pyrimidin-4-yl]urea, Serine/threonine-protein kinase SIK3
Authors:Kack, H, Oster, L.
Deposit date:2023-11-14
Release date:2024-03-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structures of salt inducible kinase 3 in complex with pharmacological inhibitors reveal determinants for binding and selectivity.
J.Biol.Chem., 2024
8R4U
DownloadVisualize
BU of 8r4u by Molmil
Structure of salt-inducible kinase 3 with inhibitors
Descriptor: 8-[(5-azanyl-1,3-dioxan-2-yl)methyl]-6-[2-chloranyl-4-(3-fluoranylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one, SULFATE ION, Serine/threonine-protein kinase SIK3, ...
Authors:Kack, H, Oster, L.
Deposit date:2023-11-14
Release date:2024-03-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.416 Å)
Cite:The structures of salt inducible kinase 3 in complex with pharmacological inhibitors reveal determinants for binding and selectivity.
J.Biol.Chem., 2024
8U8J
DownloadVisualize
BU of 8u8j by Molmil
Co-crystal structure of phosphorylated ERK2 in complex with ERK1/2 inhibitor #16
Descriptor: (4M)-4-{(4R)-3-[(2S)-2-methylbutyl][1,2,4]triazolo[4,3-a]pyridin-7-yl}-N-(1-methyl-1H-pyrazol-5-yl)pyrimidin-2-amine, Mitogen-activated protein kinase 1
Authors:Anderson, J.W, Vigers, G.P.
Deposit date:2023-09-18
Release date:2024-03-27
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformation selection by ATP-competitive inhibitors and allosteric communication in ERK2.
Elife, 12, 2024
8WM0
DownloadVisualize
BU of 8wm0 by Molmil
Crystal structure of TNIK-thiopeptide wTP3 complex
Descriptor: ADENOSINE, THIOPEPTIDE wTP3, TRAF2 and NCK-interacting protein kinase
Authors:Hamada, K, Kobayashi, S, Vinogradov, A.A, Zhang, Y, Goto, Y, Suga, H, Ogata, K, Sengoku, T.
Deposit date:2023-10-01
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Compact Reprogrammed Genetic Code for De Novo Discovery of Proteolytically Stable Thiopeptides.
J.Am.Chem.Soc., 2024
8U8K
DownloadVisualize
BU of 8u8k by Molmil
Co-crystal structure of phosphorylated ERK2 in complex with ERK1/2 inhibitor #8
Descriptor: (4M)-4-{(4S)-3-[(2-chloropyridin-3-yl)methyl][1,2,4]triazolo[4,3-a]pyridin-7-yl}-N-(oxan-4-yl)pyrimidin-2-amine, Mitogen-activated protein kinase 1
Authors:Anderson, J.W, Vigers, G.P.
Deposit date:2023-09-18
Release date:2024-03-27
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformation selection by ATP-competitive inhibitors and allosteric communication in ERK2.
Elife, 12, 2024
8OF5
DownloadVisualize
BU of 8of5 by Molmil
Crystal structure of Aurora A 122-403 C290A, N332A, Q335A, C393A bound to ADP
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Miles, J.A, Hammond, K.L.R, Bayliss, R.
Deposit date:2023-03-14
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of Aurora A 122-403 C290A, N332A, Q335A, C393A bound to ADP
To Be Published
8R4O
DownloadVisualize
BU of 8r4o by Molmil
Salt inducible kinase 3 in complex with inhibitor
Descriptor: 2-[bis(fluoranyl)methoxy]-4-[6-(2-cyanopropan-2-yl)pyrazolo[1,5-a]pyridin-3-yl]-~{N}-[(1~{R},2~{S})-2-fluoranylcyclopropyl]-6-methoxy-benzamide, SULFATE ION, Serine/threonine-protein kinase SIK3, ...
Authors:Kack, H, Oster, L.
Deposit date:2023-11-14
Release date:2024-03-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.725 Å)
Cite:The structures of salt inducible kinase 3 in complex with pharmacological inhibitors reveal determinants for binding and selectivity.
J.Biol.Chem., 2024
8R10
DownloadVisualize
BU of 8r10 by Molmil
Pim1 in complex with 4-(4-hydroxystyryl)benzoic acid and Pimtide
Descriptor: (Z)-4-(4-hydroxystyryl)benzoic acid, Pimtide, Serine/threonine-protein kinase pim-1
Authors:Hochban, P.M.M, Heine, A, Diederich, W.E.
Deposit date:2023-11-01
Release date:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Pim1 in complex with 4-(4-hydroxystyryl)benzoic acid and Pimtide
To Be Published
8R18
DownloadVisualize
BU of 8r18 by Molmil
Pim1 in complex with (E)-4-(4-hydroxystyryl)benzoic acid and Pimtide
Descriptor: (E)-4-(4-hydroxystyryl)benzoic acid, 1,2-ETHANEDIOL, GLYCEROL, ...
Authors:Hochban, P.M.M, Heine, A, Diederich, W.E.
Deposit date:2023-11-01
Release date:2024-03-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Pim1 in complex with (E)-4-(4-hydroxystyryl)benzoic acid and Pimtide
To Be Published
8R1T
DownloadVisualize
BU of 8r1t by Molmil
Pim1 in complex with 4-(4-aminophenethyl)benzoic acid and Pimtide
Descriptor: 4-(4-aminophenethyl)benzoic acid, GLYCEROL, Pimtide, ...
Authors:Hochban, P.M.M, Heine, A, Diederich, W.E.
Deposit date:2023-11-02
Release date:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Pim1 in complex with 4-(4-aminophenethyl)benzoic acid and Pimtide
To Be Published
8Y6O
DownloadVisualize
BU of 8y6o by Molmil
Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U11 and tri-snRNP part
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, Centrosomal AT-AC splicing factor, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Bai, R, Yuan, M, Zhang, P, Luo, T, Shi, Y, Wan, R.
Deposit date:2024-02-02
Release date:2024-03-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structural basis of U12-type intron engagement by the fully assembled human minor spliceosome.
Science, 383, 2024
8P72
DownloadVisualize
BU of 8p72 by Molmil
Cryo-EM structure of CAK in complex with inhibitor ICEC0768
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Cushing, V.I, Koh, A.F, Feng, J, Jurgaityte, K, Bahl, A.K, Ali, S, Kotecha, A, Greber, B.J.
Deposit date:2023-05-30
Release date:2024-03-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (1.9 Å)
Cite:High-resolution cryo-EM of the human CDK-activating kinase for structure-based drug design.
Nat Commun, 15, 2024
8P71
DownloadVisualize
BU of 8p71 by Molmil
Cryo-EM structure of CAK in complex with inhibitor ICEC0574
Descriptor: (3R,4S)-4-[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]pyrrolidin-3-ol, CDK-activating kinase assembly factor MAT1, Cyclin-H, ...
Authors:Cushing, V.I, Koh, A.F, Feng, J, Jurgaityte, K, Bahl, A.K, Ali, S, Kotecha, A, Greber, B.J.
Deposit date:2023-05-30
Release date:2024-03-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2 Å)
Cite:High-resolution cryo-EM of the human CDK-activating kinase for structure-based drug design.
Nat Commun, 15, 2024
8P73
DownloadVisualize
BU of 8p73 by Molmil
Cryo-EM structure of CAK in complex with inhibitor ICEC0829
Descriptor: (3R,4R)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidine-3,4-diol, (3S,4S)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidine-3,4-diol, CDK-activating kinase assembly factor MAT1, ...
Authors:Cushing, V.I, Koh, A.F, Feng, J, Jurgaityte, K, Bahl, A.K, Ali, S, Kotecha, A, Greber, B.J.
Deposit date:2023-05-30
Release date:2024-03-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2 Å)
Cite:High-resolution cryo-EM of the human CDK-activating kinase for structure-based drug design.
Nat Commun, 15, 2024
8P79
DownloadVisualize
BU of 8p79 by Molmil
Cryo-EM structure of CAK with averaged inhibitor density
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7
Authors:Cushing, V.I, Koh, A.F, Feng, J, Jurgaityte, K, Bahl, A.K, Ali, S, Kotecha, A, Greber, B.J.
Deposit date:2023-05-30
Release date:2024-03-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (1.7 Å)
Cite:High-resolution cryo-EM of the human CDK-activating kinase for structure-based drug design.
Nat Commun, 15, 2024

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon