Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5A8D
DownloadVisualize
BU of 5a8d by Molmil
The high resolution structure of a novel alpha-L-arabinofuranosidase (CtGH43) from Clostridium thermocellum ATCC 27405
Descriptor: ACETATE ION, CARBOHYDRATE BINDING FAMILY 6, GLYCEROL, ...
Authors:Goyal, A, Ahmed, S, Sharma, K, Fontes, C.M.G.A, Najmudin, S.
Deposit date:2015-07-14
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Molecular determinants of substrate specificity revealed by the structure of Clostridium thermocellum arabinofuranosidase 43A from glycosyl hydrolase family 43 subfamily 16.
Acta Crystallogr D Struct Biol, 72, 2016
5C0P
DownloadVisualize
BU of 5c0p by Molmil
The crystal structure of endo-arabinase from Bacteroides thetaiotaomicron VPI-5482
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Endo-arabinase, ...
Authors:Tan, K, Cuff, M, Joachimiak, G, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-06-12
Release date:2015-07-01
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.532 Å)
Cite:The crystal structure of endo-arabinase from Bacteroides thetaiotaomicron VPI-5482
To Be Published
4QQS
DownloadVisualize
BU of 4qqs by Molmil
Crystal structure of a thermostable family-43 glycoside hydrolase
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Glycoside hydrolase family 43, SODIUM ION
Authors:Hassan, N, Kori, L.D, Patel, B.K.C, Divne, C, Tan, T.C.
Deposit date:2014-06-29
Release date:2015-03-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High-resolution crystal structure of a polyextreme GH43 glycosidase from Halothermothrix orenii with alpha-L-arabinofuranosidase activity.
Acta Crystallogr F Struct Biol Commun, 71, 2015
4U6D
DownloadVisualize
BU of 4u6d by Molmil
Zg3615, a family 117 glycoside hydrolase in complex with beta-3,6-anhydro-L-galactose
Descriptor: 1,2-ETHANEDIOL, 3,6-anhydro-beta-L-galactopyranose, CALCIUM ION, ...
Authors:Ficko-Blean, E.
Deposit date:2014-07-28
Release date:2015-02-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Biochemical and structural investigation of two paralogous glycoside hydrolases from Zobellia galactanivorans: novel insights into the evolution, dimerization plasticity and catalytic mechanism of the GH117 family.
Acta Crystallogr.,Sect.D, 71, 2015
4NOV
DownloadVisualize
BU of 4nov by Molmil
Xsa43E, a GH43 family enzyme from Butyrivibrio proteoclasticus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Xylosidase/arabinofuranosidase Xsa43E
Authors:Till, M, Arcus, V.L.
Deposit date:2013-11-20
Release date:2014-10-08
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structural analysis of the GH43 enzyme Xsa43E from Butyrivibrio proteoclasticus
ACTA CRYSTALLOGR.,SECT.F, 70, 2014
4MLG
DownloadVisualize
BU of 4mlg by Molmil
Structure of RS223-Beta-xylosidase
Descriptor: Beta-xylosidase, CALCIUM ION, SULFATE ION
Authors:Jordan, D, Braker, J, Wagschal, K, Lee, C, Dubrovska, I, Anderson, S, Wawrzak, Z.
Deposit date:2013-09-06
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of RS223-Beta-xylosidase
To be Published
4COT
DownloadVisualize
BU of 4cot by Molmil
The importance of the Abn2 calcium cluster in the endo-1,5- arabinanase activity from Bacillus subtilis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, EXTRACELLULAR ENDO-ALPHA-(1->5)-L-ARABINANASE 2, NICKEL (II) ION
Authors:McVey, C.E, Ferreira, M.J, Correia, B, Lahiri, S, deSanctis, D, Carrondo, M.A, Lindley, P.F, de Sa-Nogueira, I, Soares, C.M, Bento, I.
Deposit date:2014-01-31
Release date:2014-03-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Importance of the Abn2 Calcium Cluster in the Endo-1,5-Arabinanase Activity from Bacillus Subtilis.
J.Biol.Inorg.Chem., 19, 2014
4KC8
DownloadVisualize
BU of 4kc8 by Molmil
Crystal Structure of Endo-1,5-alpha-L-arabinanase from Thermotoga petrophila RKU-1 in complex with TRIS
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Glycoside hydrolase, ...
Authors:Nascimento, A.F.Z, Polo, C.C, Santos, C.R, Costa, M.C.M.F, Mesa, A.N, Prade, R.A, Ruller, R, Squina, F.M, Murakami, M.T.
Deposit date:2013-04-24
Release date:2014-02-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases.
J.Biol.Chem., 289, 2014
4KC7
DownloadVisualize
BU of 4kc7 by Molmil
Crystal Structure of Endo-1,5-alpha-L-arabinanase from Thermotoga petrophila RKU-1
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Glycoside hydrolase, ...
Authors:Nascimento, A.F.Z, Polo, C.C, Santos, C.R, Costa, M.C.M.F, Mesa, A.N, Prade, R.A, Ruller, R, Squina, F.M, Murakami, M.T.
Deposit date:2013-04-24
Release date:2014-02-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases.
J.Biol.Chem., 289, 2014
4KCB
DownloadVisualize
BU of 4kcb by Molmil
Crystal Structure of Exo-1,5-alpha-L-arabinanase from Bovine Ruminal Metagenomic Library
Descriptor: Arabinan endo-1,5-alpha-L-arabinosidase, PHOSPHATE ION
Authors:Santos, C.R, Polo, C.C, Costa, M.C.M.F, Nascimento, A.F.Z, Wong, D.W.S, Murakami, M.T.
Deposit date:2013-04-24
Release date:2014-02-05
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases.
J.Biol.Chem., 289, 2014
3VT1
DownloadVisualize
BU of 3vt1 by Molmil
Crystal structure of Ct1,3Gal43A in complex with galactose
Descriptor: Ricin B lectin, beta-D-galactopyranose
Authors:Jiang, D, Fan, J, Wang, X, Zhao, Y, Huang, B, Zhang, X.C.
Deposit date:2012-05-18
Release date:2012-12-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.187 Å)
Cite:Crystal structure of 1,3Gal43A, an exo-beta-1,3-galactanase from Clostridium thermocellum
J.Struct.Biol., 180, 2012
3VT2
DownloadVisualize
BU of 3vt2 by Molmil
Crystal structure of Ct1,3Gal43A in complex with isopropy-beta-D-thiogalactoside
Descriptor: 1-methylethyl 1-thio-beta-D-galactopyranoside, GLYCEROL, Ricin B lectin
Authors:Jiang, D, Fan, J, Wang, X, Zhao, Y, Huang, B, Zhang, X.C.
Deposit date:2012-05-18
Release date:2012-12-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Crystal structure of 1,3Gal43A, an exo-beta-1,3-galactanase from Clostridium thermocellum
J.Struct.Biol., 180, 2012
3VT0
DownloadVisualize
BU of 3vt0 by Molmil
Crystal structure of Ct1,3Gal43A in complex with lactose
Descriptor: GLYCEROL, Ricin B lectin, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Jiang, D, Fan, J, Wang, X, Zhao, Y, Huang, B, Zhang, X.C.
Deposit date:2012-05-18
Release date:2012-12-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.913 Å)
Cite:Crystal structure of 1,3Gal43A, an exo-beta-1,3-galactanase from Clostridium thermocellum
J.Struct.Biol., 180, 2012
3VSF
DownloadVisualize
BU of 3vsf by Molmil
Crystal structure of 1,3Gal43A, an exo-beta-1,3-Galactanase from Clostridium thermocellum
Descriptor: GLYCEROL, Ricin B lectin
Authors:Jiang, D, Fan, J, Wang, X, Zhao, Y, Huang, B, Zhang, X.C.
Deposit date:2012-04-25
Release date:2012-12-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.757 Å)
Cite:Crystal structure of 1,3Gal43A, an exo-beta-1,3-galactanase from Clostridium thermocellum
J.Struct.Biol., 180, 2012
3VSZ
DownloadVisualize
BU of 3vsz by Molmil
Crystal structure of Ct1,3Gal43A in complex with galactan
Descriptor: GLYCEROL, Ricin B lectin, beta-D-galactopyranose-(1-3)-beta-D-galactopyranose, ...
Authors:Jiang, D, Fan, J, Wang, X, Zhao, Y, Huang, B, Zhang, X.C.
Deposit date:2012-05-18
Release date:2012-12-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.893 Å)
Cite:Crystal structure of 1,3Gal43A, an exo-beta-1,3-galactanase from Clostridium thermocellum
J.Struct.Biol., 180, 2012
4AK6
DownloadVisualize
BU of 4ak6 by Molmil
BpGH117_H302E mutant glycoside hydrolase
Descriptor: ANHYDRO-ALPHA-L-GALACTOSIDASE, MAGNESIUM ION
Authors:Hehemann, J.H, Smyth, L, Yadav, A, Vocadlo, D.J, Boraston, A.B.
Deposit date:2012-02-21
Release date:2012-03-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Analysis of Keystone Enzyme in Agar Hydrolysis Provides Insight Into the Degradation (of a Polysaccharide from) Red Seaweeds.
J.Biol.Chem., 287, 2012
4AK7
DownloadVisualize
BU of 4ak7 by Molmil
Crystal structure of BpGH117_E303Q in complex with neoagarobiose
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ANHYDRO-ALPHA-L-GALACTOSIDASE, ...
Authors:Hehemann, J.H, Smyth, L, Yadav, A, Vocadlo, D.J, Boraston, A.B.
Deposit date:2012-02-21
Release date:2012-03-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Analysis of Keystone Enzyme in Agar Hydrolysis Provides Insight Into the Degradation (of a Polysaccharide from) Red Seaweeds.
J.Biol.Chem., 287, 2012
4AK5
DownloadVisualize
BU of 4ak5 by Molmil
Native crystal structure of BpGH117
Descriptor: 1,2-ETHANEDIOL, ANHYDRO-ALPHA-L-GALACTOSIDASE, CHLORIDE ION, ...
Authors:Hehemann, J.H, Smyth, L, Yadav, A, Vocadlo, D.J, Boraston, A.B.
Deposit date:2012-02-21
Release date:2012-03-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Analysis of Keystone Enzyme in Agar Hydrolysis Provides Insight Into the Degradation (of a Polysaccharide from) Red Seaweeds.
J.Biol.Chem., 287, 2012
3R4Y
DownloadVisualize
BU of 3r4y by Molmil
Crystal structure of alpha-neoagarobiose hydrolase (ALPHA-NABH) from Saccharophagus degradans 2-40
Descriptor: Glycosyl hydrolase family 32, N terminal
Authors:Lee, S, Lee, J.Y, Ha, S.C, Shin, D.H, Kim, K.H, Bang, W.G, Kim, S.H, Choi, I.G.
Deposit date:2011-03-18
Release date:2012-02-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a key enzyme in the agarolytic pathway, alpha-neoagarobiose hydrolase from Saccharophagus degradans 2-40
Biochem.Biophys.Res.Commun., 412, 2011
3R4Z
DownloadVisualize
BU of 3r4z by Molmil
Crystal structure of alpha-neoagarobiose hydrolase (ALPHA-NABH) in complex with alpha-d-galactopyranose from Saccharophagus degradans 2-40
Descriptor: Glycosyl hydrolase family 32, N terminal, alpha-D-galactopyranose
Authors:Lee, S, Lee, J.Y, Ha, S.C, Shin, D.H, Kim, K.H, Bang, W.G, Kim, S.H, Choi, I.G.
Deposit date:2011-03-18
Release date:2012-02-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of a key enzyme in the agarolytic pathway, alpha-neoagarobiose hydrolase from Saccharophagus degradans 2-40
Biochem.Biophys.Res.Commun., 412, 2011
3QZ4
DownloadVisualize
BU of 3qz4 by Molmil
Crystal structure of an Endo-1,4-beta-xylanase D (BT_3675) from Bacteroides thetaiotaomicron VPI-5482 at 1.74 A resolution
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Endo-1,4-beta-xylanase D, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-03-04
Release date:2011-04-06
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of an Endo-1,4-beta-xylanase D (BT_3675) from Bacteroides thetaiotaomicron VPI-5482 at 1.74 A resolution
To be published
2X8F
DownloadVisualize
BU of 2x8f by Molmil
Native structure of Endo-1,5-alpha-L-arabinanases from Bacillus subtilis
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:de Sanctis, D, Inacio, J.M, Lindley, P.F, de Sa-Nogueira, I, Bento, I.
Deposit date:2010-03-09
Release date:2011-03-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:New Evidence for the Role of Calcium in the Glycosidase Reaction of Gh43 Arabinanases.
FEBS J., 277, 2010
2X8S
DownloadVisualize
BU of 2x8s by Molmil
Crystal Structure of the Abn2 D171A mutant in complex with arabinotriose
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:deSanctis, D, Inacio, J.M, Lindley, P.F, de Sa-Nogueira, I, Bento, I.
Deposit date:2010-03-11
Release date:2011-03-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:New Evidence for the Role of Calcium in the Glycosidase Reaction of Gh43 Arabinanases.
FEBS J., 277, 2010
2X8T
DownloadVisualize
BU of 2x8t by Molmil
Crystal Structure of the Abn2 H318A mutant
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:deSanctis, D, Inacio, J.M, Lindley, P.F, de Sa-Nogueira, I, Bento, I.
Deposit date:2010-03-11
Release date:2011-03-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:New Evidence for the Role of Calcium in the Glycosidase Reaction of Gh43 Arabinanases.
FEBS J., 277, 2010
3P2N
DownloadVisualize
BU of 3p2n by Molmil
Discovery and structural characterization of a new glycoside hydrolase family abundant in coastal waters that was annotated as 'hypothetical protein'
Descriptor: 3,6-anhydro-alpha-L-galactosidase, CHLORIDE ION, ZINC ION
Authors:Rebuffet, E, Barbeyron, T, Czjzek, M, Michel, G.
Deposit date:2010-10-03
Release date:2011-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Discovery and structural characterization of a novel glycosidase family of marine origin.
Environ Microbiol, 13, 2011

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon