8D9T

AP-1, Arf1, Nef lattice on MHC-I lipopeptide incorporated narrow membrane tubes, centered on gamma-Arf1

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
0	0006955	biological_process	immune response
0	0019882	biological_process	antigen processing and presentation
1	0006955	biological_process	immune response
1	0019882	biological_process	antigen processing and presentation
A	0000139	cellular_component	Golgi membrane
A	0001822	biological_process	kidney development
A	0005515	molecular_function	protein binding
A	0005765	cellular_component	lysosomal membrane
A	0005769	cellular_component	early endosome
A	0005794	cellular_component	Golgi apparatus
A	0005829	cellular_component	cytosol
A	0006886	biological_process	intracellular protein transport
A	0007368	biological_process	determination of left/right symmetry
A	0007507	biological_process	heart development
A	0015031	biological_process	protein transport
A	0016020	cellular_component	membrane
A	0016192	biological_process	vesicle-mediated transport
A	0019901	molecular_function	protein kinase binding
A	0030117	cellular_component	membrane coat
A	0030121	cellular_component	AP-1 adaptor complex
A	0030131	cellular_component	clathrin adaptor complex
A	0030276	molecular_function	clathrin binding
A	0030659	cellular_component	cytoplasmic vesicle membrane
A	0030665	cellular_component	clathrin-coated vesicle membrane
A	0031410	cellular_component	cytoplasmic vesicle
A	0032588	cellular_component	trans-Golgi network membrane
A	0043231	cellular_component	intracellular membrane-bounded organelle
A	0060155	biological_process	platelet dense granule organization
A	0110010	biological_process	basolateral protein secretion
A	1903232	biological_process	melanosome assembly
B	0000139	cellular_component	Golgi membrane
B	0001822	biological_process	kidney development
B	0005515	molecular_function	protein binding
B	0005765	cellular_component	lysosomal membrane
B	0005769	cellular_component	early endosome
B	0005794	cellular_component	Golgi apparatus
B	0005829	cellular_component	cytosol
B	0006886	biological_process	intracellular protein transport
B	0007368	biological_process	determination of left/right symmetry
B	0007507	biological_process	heart development
B	0015031	biological_process	protein transport
B	0016020	cellular_component	membrane
B	0016192	biological_process	vesicle-mediated transport
B	0019901	molecular_function	protein kinase binding
B	0030117	cellular_component	membrane coat
B	0030121	cellular_component	AP-1 adaptor complex
B	0030131	cellular_component	clathrin adaptor complex
B	0030276	molecular_function	clathrin binding
B	0030659	cellular_component	cytoplasmic vesicle membrane
B	0030665	cellular_component	clathrin-coated vesicle membrane
B	0031410	cellular_component	cytoplasmic vesicle
B	0032588	cellular_component	trans-Golgi network membrane
B	0043231	cellular_component	intracellular membrane-bounded organelle
B	0060155	biological_process	platelet dense granule organization
B	0110010	biological_process	basolateral protein secretion
B	1903232	biological_process	melanosome assembly
C	0000139	cellular_component	Golgi membrane
C	0003924	molecular_function	GTPase activity
C	0005525	molecular_function	GTP binding
C	0005737	cellular_component	cytoplasm
C	0005794	cellular_component	Golgi apparatus
C	0005886	cellular_component	plasma membrane
C	0006886	biological_process	intracellular protein transport
C	0014069	cellular_component	postsynaptic density
C	0015031	biological_process	protein transport
C	0016020	cellular_component	membrane
C	0016192	biological_process	vesicle-mediated transport
D	0000139	cellular_component	Golgi membrane
D	0001822	biological_process	kidney development
D	0005515	molecular_function	protein binding
D	0005765	cellular_component	lysosomal membrane
D	0005769	cellular_component	early endosome
D	0005794	cellular_component	Golgi apparatus
D	0005829	cellular_component	cytosol
D	0006886	biological_process	intracellular protein transport
D	0007368	biological_process	determination of left/right symmetry
D	0007507	biological_process	heart development
D	0015031	biological_process	protein transport
D	0016020	cellular_component	membrane
D	0016192	biological_process	vesicle-mediated transport
D	0019901	molecular_function	protein kinase binding
D	0030117	cellular_component	membrane coat
D	0030121	cellular_component	AP-1 adaptor complex
D	0030131	cellular_component	clathrin adaptor complex
D	0030276	molecular_function	clathrin binding
D	0030659	cellular_component	cytoplasmic vesicle membrane
D	0030665	cellular_component	clathrin-coated vesicle membrane
D	0031410	cellular_component	cytoplasmic vesicle
D	0032588	cellular_component	trans-Golgi network membrane
D	0043231	cellular_component	intracellular membrane-bounded organelle
D	0060155	biological_process	platelet dense granule organization
D	0110010	biological_process	basolateral protein secretion
D	1903232	biological_process	melanosome assembly
E	0000139	cellular_component	Golgi membrane
E	0001822	biological_process	kidney development
E	0005515	molecular_function	protein binding
E	0005765	cellular_component	lysosomal membrane
E	0005769	cellular_component	early endosome
E	0005794	cellular_component	Golgi apparatus
E	0005829	cellular_component	cytosol
E	0006886	biological_process	intracellular protein transport
E	0007368	biological_process	determination of left/right symmetry
E	0007507	biological_process	heart development
E	0015031	biological_process	protein transport
E	0016020	cellular_component	membrane
E	0016192	biological_process	vesicle-mediated transport
E	0019901	molecular_function	protein kinase binding
E	0030117	cellular_component	membrane coat
E	0030121	cellular_component	AP-1 adaptor complex
E	0030131	cellular_component	clathrin adaptor complex
E	0030276	molecular_function	clathrin binding
E	0030659	cellular_component	cytoplasmic vesicle membrane
E	0030665	cellular_component	clathrin-coated vesicle membrane
E	0031410	cellular_component	cytoplasmic vesicle
E	0032588	cellular_component	trans-Golgi network membrane
E	0043231	cellular_component	intracellular membrane-bounded organelle
E	0060155	biological_process	platelet dense granule organization
E	0110010	biological_process	basolateral protein secretion
E	1903232	biological_process	melanosome assembly
F	0000139	cellular_component	Golgi membrane
F	0001822	biological_process	kidney development
F	0005515	molecular_function	protein binding
F	0005765	cellular_component	lysosomal membrane
F	0005769	cellular_component	early endosome
F	0005794	cellular_component	Golgi apparatus
F	0005829	cellular_component	cytosol
F	0006886	biological_process	intracellular protein transport
F	0007368	biological_process	determination of left/right symmetry
F	0007507	biological_process	heart development
F	0015031	biological_process	protein transport
F	0016020	cellular_component	membrane
F	0016192	biological_process	vesicle-mediated transport
F	0019901	molecular_function	protein kinase binding
F	0030117	cellular_component	membrane coat
F	0030121	cellular_component	AP-1 adaptor complex
F	0030131	cellular_component	clathrin adaptor complex
F	0030276	molecular_function	clathrin binding
F	0030659	cellular_component	cytoplasmic vesicle membrane
F	0030665	cellular_component	clathrin-coated vesicle membrane
F	0031410	cellular_component	cytoplasmic vesicle
F	0032588	cellular_component	trans-Golgi network membrane
F	0043231	cellular_component	intracellular membrane-bounded organelle
F	0060155	biological_process	platelet dense granule organization
F	0110010	biological_process	basolateral protein secretion
F	1903232	biological_process	melanosome assembly
G	0006886	biological_process	intracellular protein transport
G	0016192	biological_process	vesicle-mediated transport
G	0030117	cellular_component	membrane coat
H	0000139	cellular_component	Golgi membrane
H	0003924	molecular_function	GTPase activity
H	0005525	molecular_function	GTP binding
H	0005737	cellular_component	cytoplasm
H	0005794	cellular_component	Golgi apparatus
H	0005886	cellular_component	plasma membrane
H	0006886	biological_process	intracellular protein transport
H	0014069	cellular_component	postsynaptic density
H	0015031	biological_process	protein transport
H	0016020	cellular_component	membrane
H	0016192	biological_process	vesicle-mediated transport
I	0000139	cellular_component	Golgi membrane
I	0001822	biological_process	kidney development
I	0005515	molecular_function	protein binding
I	0005765	cellular_component	lysosomal membrane
I	0005769	cellular_component	early endosome
I	0005794	cellular_component	Golgi apparatus
I	0005829	cellular_component	cytosol
I	0006886	biological_process	intracellular protein transport
I	0007368	biological_process	determination of left/right symmetry
I	0007507	biological_process	heart development
I	0015031	biological_process	protein transport
I	0016020	cellular_component	membrane
I	0016192	biological_process	vesicle-mediated transport
I	0019901	molecular_function	protein kinase binding
I	0030117	cellular_component	membrane coat
I	0030121	cellular_component	AP-1 adaptor complex
I	0030131	cellular_component	clathrin adaptor complex
I	0030276	molecular_function	clathrin binding
I	0030659	cellular_component	cytoplasmic vesicle membrane
I	0030665	cellular_component	clathrin-coated vesicle membrane
I	0031410	cellular_component	cytoplasmic vesicle
I	0032588	cellular_component	trans-Golgi network membrane
I	0043231	cellular_component	intracellular membrane-bounded organelle
I	0060155	biological_process	platelet dense granule organization
I	0110010	biological_process	basolateral protein secretion
I	1903232	biological_process	melanosome assembly
J	0000139	cellular_component	Golgi membrane
J	0003924	molecular_function	GTPase activity
J	0005525	molecular_function	GTP binding
J	0005737	cellular_component	cytoplasm
J	0005794	cellular_component	Golgi apparatus
J	0005886	cellular_component	plasma membrane
J	0006886	biological_process	intracellular protein transport
J	0014069	cellular_component	postsynaptic density
J	0015031	biological_process	protein transport
J	0016020	cellular_component	membrane
J	0016192	biological_process	vesicle-mediated transport
K	0000139	cellular_component	Golgi membrane
K	0003924	molecular_function	GTPase activity
K	0005525	molecular_function	GTP binding
K	0005737	cellular_component	cytoplasm
K	0005794	cellular_component	Golgi apparatus
K	0005886	cellular_component	plasma membrane
K	0006886	biological_process	intracellular protein transport
K	0014069	cellular_component	postsynaptic density
K	0015031	biological_process	protein transport
K	0016020	cellular_component	membrane
K	0016192	biological_process	vesicle-mediated transport
L	0005102	molecular_function	signaling receptor binding
L	0005515	molecular_function	protein binding
L	0005525	molecular_function	GTP binding
L	0005576	cellular_component	extracellular region
L	0006915	biological_process	apoptotic process
L	0016020	cellular_component	membrane
L	0017124	molecular_function	SH3 domain binding
L	0019049	biological_process	virus-mediated perturbation of host defense response
L	0019058	biological_process	viral life cycle
L	0019901	molecular_function	protein kinase binding
L	0020002	cellular_component	host cell plasma membrane
L	0031996	molecular_function	thioesterase binding
L	0033668	biological_process	symbiont-mediated suppression of host apoptosis
L	0039505	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II
L	0039521	biological_process	suppression by virus of host autophagy
L	0042288	molecular_function	MHC class I protein binding
L	0042609	molecular_function	CD4 receptor binding
L	0044177	cellular_component	host cell Golgi apparatus
L	0044178	cellular_component	host cell Golgi membrane
L	0044423	cellular_component	virion component
L	0045225	biological_process	negative regulation of CD4 production
L	0046776	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I
L	0050848	biological_process	regulation of calcium-mediated signaling
L	0051117	molecular_function	ATPase binding
L	0070206	biological_process	protein trimerization
L	0075528	biological_process	perturbation by virus of host immune response
M	0005515	molecular_function	protein binding
M	0005765	cellular_component	lysosomal membrane
M	0005769	cellular_component	early endosome
M	0005794	cellular_component	Golgi apparatus
M	0005802	cellular_component	trans-Golgi network
M	0005829	cellular_component	cytosol
M	0006886	biological_process	intracellular protein transport
M	0015031	biological_process	protein transport
M	0016020	cellular_component	membrane
M	0016192	biological_process	vesicle-mediated transport
M	0030121	cellular_component	AP-1 adaptor complex
M	0030131	cellular_component	clathrin adaptor complex
M	0030136	cellular_component	clathrin-coated vesicle
M	0030665	cellular_component	clathrin-coated vesicle membrane
M	0031410	cellular_component	cytoplasmic vesicle
M	0032438	biological_process	melanosome organization
M	0032588	cellular_component	trans-Golgi network membrane
M	0035615	molecular_function	clathrin adaptor activity
M	0035646	biological_process	endosome to melanosome transport
M	0043231	cellular_component	intracellular membrane-bounded organelle
M	0045202	cellular_component	synapse
M	0051649	biological_process	establishment of localization in cell
M	0060155	biological_process	platelet dense granule organization
M	1903232	biological_process	melanosome assembly
N	0005102	molecular_function	signaling receptor binding
N	0005515	molecular_function	protein binding
N	0005525	molecular_function	GTP binding
N	0005576	cellular_component	extracellular region
N	0006915	biological_process	apoptotic process
N	0016020	cellular_component	membrane
N	0017124	molecular_function	SH3 domain binding
N	0019049	biological_process	virus-mediated perturbation of host defense response
N	0019058	biological_process	viral life cycle
N	0019901	molecular_function	protein kinase binding
N	0020002	cellular_component	host cell plasma membrane
N	0031996	molecular_function	thioesterase binding
N	0033668	biological_process	symbiont-mediated suppression of host apoptosis
N	0039505	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II
N	0039521	biological_process	suppression by virus of host autophagy
N	0042288	molecular_function	MHC class I protein binding
N	0042609	molecular_function	CD4 receptor binding
N	0044177	cellular_component	host cell Golgi apparatus
N	0044178	cellular_component	host cell Golgi membrane
N	0044423	cellular_component	virion component
N	0045225	biological_process	negative regulation of CD4 production
N	0046776	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I
N	0050848	biological_process	regulation of calcium-mediated signaling
N	0051117	molecular_function	ATPase binding
N	0070206	biological_process	protein trimerization
N	0075528	biological_process	perturbation by virus of host immune response
O	0000139	cellular_component	Golgi membrane
O	0003924	molecular_function	GTPase activity
O	0005525	molecular_function	GTP binding
O	0005737	cellular_component	cytoplasm
O	0005794	cellular_component	Golgi apparatus
O	0005886	cellular_component	plasma membrane
O	0006886	biological_process	intracellular protein transport
O	0014069	cellular_component	postsynaptic density
O	0015031	biological_process	protein transport
O	0016020	cellular_component	membrane
O	0016192	biological_process	vesicle-mediated transport
P	0000139	cellular_component	Golgi membrane
P	0003924	molecular_function	GTPase activity
P	0005525	molecular_function	GTP binding
P	0005737	cellular_component	cytoplasm
P	0005794	cellular_component	Golgi apparatus
P	0005886	cellular_component	plasma membrane
P	0006886	biological_process	intracellular protein transport
P	0014069	cellular_component	postsynaptic density
P	0015031	biological_process	protein transport
P	0016020	cellular_component	membrane
P	0016192	biological_process	vesicle-mediated transport
Q	0000139	cellular_component	Golgi membrane
Q	0003924	molecular_function	GTPase activity
Q	0005525	molecular_function	GTP binding
Q	0005737	cellular_component	cytoplasm
Q	0005794	cellular_component	Golgi apparatus
Q	0005886	cellular_component	plasma membrane
Q	0006886	biological_process	intracellular protein transport
Q	0014069	cellular_component	postsynaptic density
Q	0015031	biological_process	protein transport
Q	0016020	cellular_component	membrane
Q	0016192	biological_process	vesicle-mediated transport
R	0006886	biological_process	intracellular protein transport
R	0016192	biological_process	vesicle-mediated transport
R	0030117	cellular_component	membrane coat
S	0000139	cellular_component	Golgi membrane
S	0005515	molecular_function	protein binding
S	0005765	cellular_component	lysosomal membrane
S	0005769	cellular_component	early endosome
S	0005794	cellular_component	Golgi apparatus
S	0005829	cellular_component	cytosol
S	0005905	cellular_component	clathrin-coated pit
S	0006605	biological_process	protein targeting
S	0006886	biological_process	intracellular protein transport
S	0015031	biological_process	protein transport
S	0016192	biological_process	vesicle-mediated transport
S	0030117	cellular_component	membrane coat
S	0030121	cellular_component	AP-1 adaptor complex
S	0030659	cellular_component	cytoplasmic vesicle membrane
S	0031410	cellular_component	cytoplasmic vesicle
S	0032588	cellular_component	trans-Golgi network membrane
S	0035615	molecular_function	clathrin adaptor activity
S	0043231	cellular_component	intracellular membrane-bounded organelle
S	0060155	biological_process	platelet dense granule organization
S	1903232	biological_process	melanosome assembly
T	0006886	biological_process	intracellular protein transport
T	0016192	biological_process	vesicle-mediated transport
T	0030117	cellular_component	membrane coat
U	0006886	biological_process	intracellular protein transport
U	0016192	biological_process	vesicle-mediated transport
U	0030117	cellular_component	membrane coat
V	0006886	biological_process	intracellular protein transport
V	0016192	biological_process	vesicle-mediated transport
V	0030117	cellular_component	membrane coat
W	0006886	biological_process	intracellular protein transport
W	0016192	biological_process	vesicle-mediated transport
W	0030117	cellular_component	membrane coat
X	0000139	cellular_component	Golgi membrane
X	0003924	molecular_function	GTPase activity
X	0005525	molecular_function	GTP binding
X	0005737	cellular_component	cytoplasm
X	0005794	cellular_component	Golgi apparatus
X	0005886	cellular_component	plasma membrane
X	0006886	biological_process	intracellular protein transport
X	0014069	cellular_component	postsynaptic density
X	0015031	biological_process	protein transport
X	0016020	cellular_component	membrane
X	0016192	biological_process	vesicle-mediated transport
Y	0006955	biological_process	immune response
Y	0019882	biological_process	antigen processing and presentation
Z	0000139	cellular_component	Golgi membrane
Z	0003924	molecular_function	GTPase activity
Z	0005525	molecular_function	GTP binding
Z	0005737	cellular_component	cytoplasm
Z	0005794	cellular_component	Golgi apparatus
Z	0005886	cellular_component	plasma membrane
Z	0006886	biological_process	intracellular protein transport
Z	0014069	cellular_component	postsynaptic density
Z	0015031	biological_process	protein transport
Z	0016020	cellular_component	membrane
Z	0016192	biological_process	vesicle-mediated transport
a	0000139	cellular_component	Golgi membrane
a	0003924	molecular_function	GTPase activity
a	0005525	molecular_function	GTP binding
a	0005737	cellular_component	cytoplasm
a	0005794	cellular_component	Golgi apparatus
a	0005886	cellular_component	plasma membrane
a	0006886	biological_process	intracellular protein transport
a	0014069	cellular_component	postsynaptic density
a	0015031	biological_process	protein transport
a	0016020	cellular_component	membrane
a	0016192	biological_process	vesicle-mediated transport
b	0000139	cellular_component	Golgi membrane
b	0003924	molecular_function	GTPase activity
b	0005525	molecular_function	GTP binding
b	0005737	cellular_component	cytoplasm
b	0005794	cellular_component	Golgi apparatus
b	0005886	cellular_component	plasma membrane
b	0006886	biological_process	intracellular protein transport
b	0014069	cellular_component	postsynaptic density
b	0015031	biological_process	protein transport
b	0016020	cellular_component	membrane
b	0016192	biological_process	vesicle-mediated transport
c	0000139	cellular_component	Golgi membrane
c	0003924	molecular_function	GTPase activity
c	0005525	molecular_function	GTP binding
c	0005737	cellular_component	cytoplasm
c	0005794	cellular_component	Golgi apparatus
c	0005886	cellular_component	plasma membrane
c	0006886	biological_process	intracellular protein transport
c	0014069	cellular_component	postsynaptic density
c	0015031	biological_process	protein transport
c	0016020	cellular_component	membrane
c	0016192	biological_process	vesicle-mediated transport
d	0005102	molecular_function	signaling receptor binding
d	0005515	molecular_function	protein binding
d	0005525	molecular_function	GTP binding
d	0005576	cellular_component	extracellular region
d	0006915	biological_process	apoptotic process
d	0016020	cellular_component	membrane
d	0017124	molecular_function	SH3 domain binding
d	0019049	biological_process	virus-mediated perturbation of host defense response
d	0019058	biological_process	viral life cycle
d	0019901	molecular_function	protein kinase binding
d	0020002	cellular_component	host cell plasma membrane
d	0031996	molecular_function	thioesterase binding
d	0033668	biological_process	symbiont-mediated suppression of host apoptosis
d	0039505	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II
d	0039521	biological_process	suppression by virus of host autophagy
d	0042288	molecular_function	MHC class I protein binding
d	0042609	molecular_function	CD4 receptor binding
d	0044177	cellular_component	host cell Golgi apparatus
d	0044178	cellular_component	host cell Golgi membrane
d	0044423	cellular_component	virion component
d	0045225	biological_process	negative regulation of CD4 production
d	0046776	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I
d	0050848	biological_process	regulation of calcium-mediated signaling
d	0051117	molecular_function	ATPase binding
d	0070206	biological_process	protein trimerization
d	0075528	biological_process	perturbation by virus of host immune response
e	0005102	molecular_function	signaling receptor binding
e	0005515	molecular_function	protein binding
e	0005525	molecular_function	GTP binding
e	0005576	cellular_component	extracellular region
e	0006915	biological_process	apoptotic process
e	0016020	cellular_component	membrane
e	0017124	molecular_function	SH3 domain binding
e	0019049	biological_process	virus-mediated perturbation of host defense response
e	0019058	biological_process	viral life cycle
e	0019901	molecular_function	protein kinase binding
e	0020002	cellular_component	host cell plasma membrane
e	0031996	molecular_function	thioesterase binding
e	0033668	biological_process	symbiont-mediated suppression of host apoptosis
e	0039505	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II
e	0039521	biological_process	suppression by virus of host autophagy
e	0042288	molecular_function	MHC class I protein binding
e	0042609	molecular_function	CD4 receptor binding
e	0044177	cellular_component	host cell Golgi apparatus
e	0044178	cellular_component	host cell Golgi membrane
e	0044423	cellular_component	virion component
e	0045225	biological_process	negative regulation of CD4 production
e	0046776	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I
e	0050848	biological_process	regulation of calcium-mediated signaling
e	0051117	molecular_function	ATPase binding
e	0070206	biological_process	protein trimerization
e	0075528	biological_process	perturbation by virus of host immune response
f	0005102	molecular_function	signaling receptor binding
f	0005515	molecular_function	protein binding
f	0005525	molecular_function	GTP binding
f	0005576	cellular_component	extracellular region
f	0006915	biological_process	apoptotic process
f	0016020	cellular_component	membrane
f	0017124	molecular_function	SH3 domain binding
f	0019049	biological_process	virus-mediated perturbation of host defense response
f	0019058	biological_process	viral life cycle
f	0019901	molecular_function	protein kinase binding
f	0020002	cellular_component	host cell plasma membrane
f	0031996	molecular_function	thioesterase binding
f	0033668	biological_process	symbiont-mediated suppression of host apoptosis
f	0039505	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II
f	0039521	biological_process	suppression by virus of host autophagy
f	0042288	molecular_function	MHC class I protein binding
f	0042609	molecular_function	CD4 receptor binding
f	0044177	cellular_component	host cell Golgi apparatus
f	0044178	cellular_component	host cell Golgi membrane
f	0044423	cellular_component	virion component
f	0045225	biological_process	negative regulation of CD4 production
f	0046776	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I
f	0050848	biological_process	regulation of calcium-mediated signaling
f	0051117	molecular_function	ATPase binding
f	0070206	biological_process	protein trimerization
f	0075528	biological_process	perturbation by virus of host immune response
g	0005102	molecular_function	signaling receptor binding
g	0005515	molecular_function	protein binding
g	0005525	molecular_function	GTP binding
g	0005576	cellular_component	extracellular region
g	0006915	biological_process	apoptotic process
g	0016020	cellular_component	membrane
g	0017124	molecular_function	SH3 domain binding
g	0019049	biological_process	virus-mediated perturbation of host defense response
g	0019058	biological_process	viral life cycle
g	0019901	molecular_function	protein kinase binding
g	0020002	cellular_component	host cell plasma membrane
g	0031996	molecular_function	thioesterase binding
g	0033668	biological_process	symbiont-mediated suppression of host apoptosis
g	0039505	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II
g	0039521	biological_process	suppression by virus of host autophagy
g	0042288	molecular_function	MHC class I protein binding
g	0042609	molecular_function	CD4 receptor binding
g	0044177	cellular_component	host cell Golgi apparatus
g	0044178	cellular_component	host cell Golgi membrane
g	0044423	cellular_component	virion component
g	0045225	biological_process	negative regulation of CD4 production
g	0046776	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I
g	0050848	biological_process	regulation of calcium-mediated signaling
g	0051117	molecular_function	ATPase binding
g	0070206	biological_process	protein trimerization
g	0075528	biological_process	perturbation by virus of host immune response
h	0005102	molecular_function	signaling receptor binding
h	0005515	molecular_function	protein binding
h	0005525	molecular_function	GTP binding
h	0005576	cellular_component	extracellular region
h	0006915	biological_process	apoptotic process
h	0016020	cellular_component	membrane
h	0017124	molecular_function	SH3 domain binding
h	0019049	biological_process	virus-mediated perturbation of host defense response
h	0019058	biological_process	viral life cycle
h	0019901	molecular_function	protein kinase binding
h	0020002	cellular_component	host cell plasma membrane
h	0031996	molecular_function	thioesterase binding
h	0033668	biological_process	symbiont-mediated suppression of host apoptosis
h	0039505	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II
h	0039521	biological_process	suppression by virus of host autophagy
h	0042288	molecular_function	MHC class I protein binding
h	0042609	molecular_function	CD4 receptor binding
h	0044177	cellular_component	host cell Golgi apparatus
h	0044178	cellular_component	host cell Golgi membrane
h	0044423	cellular_component	virion component
h	0045225	biological_process	negative regulation of CD4 production
h	0046776	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I
h	0050848	biological_process	regulation of calcium-mediated signaling
h	0051117	molecular_function	ATPase binding
h	0070206	biological_process	protein trimerization
h	0075528	biological_process	perturbation by virus of host immune response
i	0005515	molecular_function	protein binding
i	0005765	cellular_component	lysosomal membrane
i	0005769	cellular_component	early endosome
i	0005794	cellular_component	Golgi apparatus
i	0005802	cellular_component	trans-Golgi network
i	0005829	cellular_component	cytosol
i	0006886	biological_process	intracellular protein transport
i	0015031	biological_process	protein transport
i	0016020	cellular_component	membrane
i	0016192	biological_process	vesicle-mediated transport
i	0030121	cellular_component	AP-1 adaptor complex
i	0030131	cellular_component	clathrin adaptor complex
i	0030136	cellular_component	clathrin-coated vesicle
i	0030665	cellular_component	clathrin-coated vesicle membrane
i	0031410	cellular_component	cytoplasmic vesicle
i	0032438	biological_process	melanosome organization
i	0032588	cellular_component	trans-Golgi network membrane
i	0035615	molecular_function	clathrin adaptor activity
i	0035646	biological_process	endosome to melanosome transport
i	0043231	cellular_component	intracellular membrane-bounded organelle
i	0045202	cellular_component	synapse
i	0051649	biological_process	establishment of localization in cell
i	0060155	biological_process	platelet dense granule organization
i	1903232	biological_process	melanosome assembly
j	0005515	molecular_function	protein binding
j	0005765	cellular_component	lysosomal membrane
j	0005769	cellular_component	early endosome
j	0005794	cellular_component	Golgi apparatus
j	0005802	cellular_component	trans-Golgi network
j	0005829	cellular_component	cytosol
j	0006886	biological_process	intracellular protein transport
j	0015031	biological_process	protein transport
j	0016020	cellular_component	membrane
j	0016192	biological_process	vesicle-mediated transport
j	0030121	cellular_component	AP-1 adaptor complex
j	0030131	cellular_component	clathrin adaptor complex
j	0030136	cellular_component	clathrin-coated vesicle
j	0030665	cellular_component	clathrin-coated vesicle membrane
j	0031410	cellular_component	cytoplasmic vesicle
j	0032438	biological_process	melanosome organization
j	0032588	cellular_component	trans-Golgi network membrane
j	0035615	molecular_function	clathrin adaptor activity
j	0035646	biological_process	endosome to melanosome transport
j	0043231	cellular_component	intracellular membrane-bounded organelle
j	0045202	cellular_component	synapse
j	0051649	biological_process	establishment of localization in cell
j	0060155	biological_process	platelet dense granule organization
j	1903232	biological_process	melanosome assembly
k	0005515	molecular_function	protein binding
k	0005765	cellular_component	lysosomal membrane
k	0005769	cellular_component	early endosome
k	0005794	cellular_component	Golgi apparatus
k	0005802	cellular_component	trans-Golgi network
k	0005829	cellular_component	cytosol
k	0006886	biological_process	intracellular protein transport
k	0015031	biological_process	protein transport
k	0016020	cellular_component	membrane
k	0016192	biological_process	vesicle-mediated transport
k	0030121	cellular_component	AP-1 adaptor complex
k	0030131	cellular_component	clathrin adaptor complex
k	0030136	cellular_component	clathrin-coated vesicle
k	0030665	cellular_component	clathrin-coated vesicle membrane
k	0031410	cellular_component	cytoplasmic vesicle
k	0032438	biological_process	melanosome organization
k	0032588	cellular_component	trans-Golgi network membrane
k	0035615	molecular_function	clathrin adaptor activity
k	0035646	biological_process	endosome to melanosome transport
k	0043231	cellular_component	intracellular membrane-bounded organelle
k	0045202	cellular_component	synapse
k	0051649	biological_process	establishment of localization in cell
k	0060155	biological_process	platelet dense granule organization
k	1903232	biological_process	melanosome assembly
l	0005515	molecular_function	protein binding
l	0005765	cellular_component	lysosomal membrane
l	0005769	cellular_component	early endosome
l	0005794	cellular_component	Golgi apparatus
l	0005802	cellular_component	trans-Golgi network
l	0005829	cellular_component	cytosol
l	0006886	biological_process	intracellular protein transport
l	0015031	biological_process	protein transport
l	0016020	cellular_component	membrane
l	0016192	biological_process	vesicle-mediated transport
l	0030121	cellular_component	AP-1 adaptor complex
l	0030131	cellular_component	clathrin adaptor complex
l	0030136	cellular_component	clathrin-coated vesicle
l	0030665	cellular_component	clathrin-coated vesicle membrane
l	0031410	cellular_component	cytoplasmic vesicle
l	0032438	biological_process	melanosome organization
l	0032588	cellular_component	trans-Golgi network membrane
l	0035615	molecular_function	clathrin adaptor activity
l	0035646	biological_process	endosome to melanosome transport
l	0043231	cellular_component	intracellular membrane-bounded organelle
l	0045202	cellular_component	synapse
l	0051649	biological_process	establishment of localization in cell
l	0060155	biological_process	platelet dense granule organization
l	1903232	biological_process	melanosome assembly
m	0005515	molecular_function	protein binding
m	0005765	cellular_component	lysosomal membrane
m	0005769	cellular_component	early endosome
m	0005794	cellular_component	Golgi apparatus
m	0005802	cellular_component	trans-Golgi network
m	0005829	cellular_component	cytosol
m	0006886	biological_process	intracellular protein transport
m	0015031	biological_process	protein transport
m	0016020	cellular_component	membrane
m	0016192	biological_process	vesicle-mediated transport
m	0030121	cellular_component	AP-1 adaptor complex
m	0030131	cellular_component	clathrin adaptor complex
m	0030136	cellular_component	clathrin-coated vesicle
m	0030665	cellular_component	clathrin-coated vesicle membrane
m	0031410	cellular_component	cytoplasmic vesicle
m	0032438	biological_process	melanosome organization
m	0032588	cellular_component	trans-Golgi network membrane
m	0035615	molecular_function	clathrin adaptor activity
m	0035646	biological_process	endosome to melanosome transport
m	0043231	cellular_component	intracellular membrane-bounded organelle
m	0045202	cellular_component	synapse
m	0051649	biological_process	establishment of localization in cell
m	0060155	biological_process	platelet dense granule organization
m	1903232	biological_process	melanosome assembly
n	0005102	molecular_function	signaling receptor binding
n	0005515	molecular_function	protein binding
n	0005525	molecular_function	GTP binding
n	0005576	cellular_component	extracellular region
n	0006915	biological_process	apoptotic process
n	0016020	cellular_component	membrane
n	0017124	molecular_function	SH3 domain binding
n	0019049	biological_process	virus-mediated perturbation of host defense response
n	0019058	biological_process	viral life cycle
n	0019901	molecular_function	protein kinase binding
n	0020002	cellular_component	host cell plasma membrane
n	0031996	molecular_function	thioesterase binding
n	0033668	biological_process	symbiont-mediated suppression of host apoptosis
n	0039505	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II
n	0039521	biological_process	suppression by virus of host autophagy
n	0042288	molecular_function	MHC class I protein binding
n	0042609	molecular_function	CD4 receptor binding
n	0044177	cellular_component	host cell Golgi apparatus
n	0044178	cellular_component	host cell Golgi membrane
n	0044423	cellular_component	virion component
n	0045225	biological_process	negative regulation of CD4 production
n	0046776	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I
n	0050848	biological_process	regulation of calcium-mediated signaling
n	0051117	molecular_function	ATPase binding
n	0070206	biological_process	protein trimerization
n	0075528	biological_process	perturbation by virus of host immune response
o	0005102	molecular_function	signaling receptor binding
o	0005515	molecular_function	protein binding
o	0005525	molecular_function	GTP binding
o	0005576	cellular_component	extracellular region
o	0006915	biological_process	apoptotic process
o	0016020	cellular_component	membrane
o	0017124	molecular_function	SH3 domain binding
o	0019049	biological_process	virus-mediated perturbation of host defense response
o	0019058	biological_process	viral life cycle
o	0019901	molecular_function	protein kinase binding
o	0020002	cellular_component	host cell plasma membrane
o	0031996	molecular_function	thioesterase binding
o	0033668	biological_process	symbiont-mediated suppression of host apoptosis
o	0039505	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II
o	0039521	biological_process	suppression by virus of host autophagy
o	0042288	molecular_function	MHC class I protein binding
o	0042609	molecular_function	CD4 receptor binding
o	0044177	cellular_component	host cell Golgi apparatus
o	0044178	cellular_component	host cell Golgi membrane
o	0044423	cellular_component	virion component
o	0045225	biological_process	negative regulation of CD4 production
o	0046776	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I
o	0050848	biological_process	regulation of calcium-mediated signaling
o	0051117	molecular_function	ATPase binding
o	0070206	biological_process	protein trimerization
o	0075528	biological_process	perturbation by virus of host immune response
p	0005102	molecular_function	signaling receptor binding
p	0005515	molecular_function	protein binding
p	0005525	molecular_function	GTP binding
p	0005576	cellular_component	extracellular region
p	0006915	biological_process	apoptotic process
p	0016020	cellular_component	membrane
p	0017124	molecular_function	SH3 domain binding
p	0019049	biological_process	virus-mediated perturbation of host defense response
p	0019058	biological_process	viral life cycle
p	0019901	molecular_function	protein kinase binding
p	0020002	cellular_component	host cell plasma membrane
p	0031996	molecular_function	thioesterase binding
p	0033668	biological_process	symbiont-mediated suppression of host apoptosis
p	0039505	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II
p	0039521	biological_process	suppression by virus of host autophagy
p	0042288	molecular_function	MHC class I protein binding
p	0042609	molecular_function	CD4 receptor binding
p	0044177	cellular_component	host cell Golgi apparatus
p	0044178	cellular_component	host cell Golgi membrane
p	0044423	cellular_component	virion component
p	0045225	biological_process	negative regulation of CD4 production
p	0046776	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I
p	0050848	biological_process	regulation of calcium-mediated signaling
p	0051117	molecular_function	ATPase binding
p	0070206	biological_process	protein trimerization
p	0075528	biological_process	perturbation by virus of host immune response
q	0005102	molecular_function	signaling receptor binding
q	0005515	molecular_function	protein binding
q	0005525	molecular_function	GTP binding
q	0005576	cellular_component	extracellular region
q	0006915	biological_process	apoptotic process
q	0016020	cellular_component	membrane
q	0017124	molecular_function	SH3 domain binding
q	0019049	biological_process	virus-mediated perturbation of host defense response
q	0019058	biological_process	viral life cycle
q	0019901	molecular_function	protein kinase binding
q	0020002	cellular_component	host cell plasma membrane
q	0031996	molecular_function	thioesterase binding
q	0033668	biological_process	symbiont-mediated suppression of host apoptosis
q	0039505	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II
q	0039521	biological_process	suppression by virus of host autophagy
q	0042288	molecular_function	MHC class I protein binding
q	0042609	molecular_function	CD4 receptor binding
q	0044177	cellular_component	host cell Golgi apparatus
q	0044178	cellular_component	host cell Golgi membrane
q	0044423	cellular_component	virion component
q	0045225	biological_process	negative regulation of CD4 production
q	0046776	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I
q	0050848	biological_process	regulation of calcium-mediated signaling
q	0051117	molecular_function	ATPase binding
q	0070206	biological_process	protein trimerization
q	0075528	biological_process	perturbation by virus of host immune response
r	0005102	molecular_function	signaling receptor binding
r	0005515	molecular_function	protein binding
r	0005525	molecular_function	GTP binding
r	0005576	cellular_component	extracellular region
r	0006915	biological_process	apoptotic process
r	0016020	cellular_component	membrane
r	0017124	molecular_function	SH3 domain binding
r	0019049	biological_process	virus-mediated perturbation of host defense response
r	0019058	biological_process	viral life cycle
r	0019901	molecular_function	protein kinase binding
r	0020002	cellular_component	host cell plasma membrane
r	0031996	molecular_function	thioesterase binding
r	0033668	biological_process	symbiont-mediated suppression of host apoptosis
r	0039505	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II
r	0039521	biological_process	suppression by virus of host autophagy
r	0042288	molecular_function	MHC class I protein binding
r	0042609	molecular_function	CD4 receptor binding
r	0044177	cellular_component	host cell Golgi apparatus
r	0044178	cellular_component	host cell Golgi membrane
r	0044423	cellular_component	virion component
r	0045225	biological_process	negative regulation of CD4 production
r	0046776	biological_process	symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I
r	0050848	biological_process	regulation of calcium-mediated signaling
r	0051117	molecular_function	ATPase binding
r	0070206	biological_process	protein trimerization
r	0075528	biological_process	perturbation by virus of host immune response
s	0000139	cellular_component	Golgi membrane
s	0005515	molecular_function	protein binding
s	0005765	cellular_component	lysosomal membrane
s	0005769	cellular_component	early endosome
s	0005794	cellular_component	Golgi apparatus
s	0005829	cellular_component	cytosol
s	0005905	cellular_component	clathrin-coated pit
s	0006605	biological_process	protein targeting
s	0006886	biological_process	intracellular protein transport
s	0015031	biological_process	protein transport
s	0016192	biological_process	vesicle-mediated transport
s	0030117	cellular_component	membrane coat
s	0030121	cellular_component	AP-1 adaptor complex
s	0030659	cellular_component	cytoplasmic vesicle membrane
s	0031410	cellular_component	cytoplasmic vesicle
s	0032588	cellular_component	trans-Golgi network membrane
s	0035615	molecular_function	clathrin adaptor activity
s	0043231	cellular_component	intracellular membrane-bounded organelle
s	0060155	biological_process	platelet dense granule organization
s	1903232	biological_process	melanosome assembly
t	0000139	cellular_component	Golgi membrane
t	0005515	molecular_function	protein binding
t	0005765	cellular_component	lysosomal membrane
t	0005769	cellular_component	early endosome
t	0005794	cellular_component	Golgi apparatus
t	0005829	cellular_component	cytosol
t	0005905	cellular_component	clathrin-coated pit
t	0006605	biological_process	protein targeting
t	0006886	biological_process	intracellular protein transport
t	0015031	biological_process	protein transport
t	0016192	biological_process	vesicle-mediated transport
t	0030117	cellular_component	membrane coat
t	0030121	cellular_component	AP-1 adaptor complex
t	0030659	cellular_component	cytoplasmic vesicle membrane
t	0031410	cellular_component	cytoplasmic vesicle
t	0032588	cellular_component	trans-Golgi network membrane
t	0035615	molecular_function	clathrin adaptor activity
t	0043231	cellular_component	intracellular membrane-bounded organelle
t	0060155	biological_process	platelet dense granule organization
t	1903232	biological_process	melanosome assembly
u	0000139	cellular_component	Golgi membrane
u	0005515	molecular_function	protein binding
u	0005765	cellular_component	lysosomal membrane
u	0005769	cellular_component	early endosome
u	0005794	cellular_component	Golgi apparatus
u	0005829	cellular_component	cytosol
u	0005905	cellular_component	clathrin-coated pit
u	0006605	biological_process	protein targeting
u	0006886	biological_process	intracellular protein transport
u	0015031	biological_process	protein transport
u	0016192	biological_process	vesicle-mediated transport
u	0030117	cellular_component	membrane coat
u	0030121	cellular_component	AP-1 adaptor complex
u	0030659	cellular_component	cytoplasmic vesicle membrane
u	0031410	cellular_component	cytoplasmic vesicle
u	0032588	cellular_component	trans-Golgi network membrane
u	0035615	molecular_function	clathrin adaptor activity
u	0043231	cellular_component	intracellular membrane-bounded organelle
u	0060155	biological_process	platelet dense granule organization
u	1903232	biological_process	melanosome assembly
v	0000139	cellular_component	Golgi membrane
v	0005515	molecular_function	protein binding
v	0005765	cellular_component	lysosomal membrane
v	0005769	cellular_component	early endosome
v	0005794	cellular_component	Golgi apparatus
v	0005829	cellular_component	cytosol
v	0005905	cellular_component	clathrin-coated pit
v	0006605	biological_process	protein targeting
v	0006886	biological_process	intracellular protein transport
v	0015031	biological_process	protein transport
v	0016192	biological_process	vesicle-mediated transport
v	0030117	cellular_component	membrane coat
v	0030121	cellular_component	AP-1 adaptor complex
v	0030659	cellular_component	cytoplasmic vesicle membrane
v	0031410	cellular_component	cytoplasmic vesicle
v	0032588	cellular_component	trans-Golgi network membrane
v	0035615	molecular_function	clathrin adaptor activity
v	0043231	cellular_component	intracellular membrane-bounded organelle
v	0060155	biological_process	platelet dense granule organization
v	1903232	biological_process	melanosome assembly
w	0000139	cellular_component	Golgi membrane
w	0005515	molecular_function	protein binding
w	0005765	cellular_component	lysosomal membrane
w	0005769	cellular_component	early endosome
w	0005794	cellular_component	Golgi apparatus
w	0005829	cellular_component	cytosol
w	0005905	cellular_component	clathrin-coated pit
w	0006605	biological_process	protein targeting
w	0006886	biological_process	intracellular protein transport
w	0015031	biological_process	protein transport
w	0016192	biological_process	vesicle-mediated transport
w	0030117	cellular_component	membrane coat
w	0030121	cellular_component	AP-1 adaptor complex
w	0030659	cellular_component	cytoplasmic vesicle membrane
w	0031410	cellular_component	cytoplasmic vesicle
w	0032588	cellular_component	trans-Golgi network membrane
w	0035615	molecular_function	clathrin adaptor activity
w	0043231	cellular_component	intracellular membrane-bounded organelle
w	0060155	biological_process	platelet dense granule organization
w	1903232	biological_process	melanosome assembly
x	0006955	biological_process	immune response
x	0019882	biological_process	antigen processing and presentation
y	0006955	biological_process	immune response
y	0019882	biological_process	antigen processing and presentation
z	0006955	biological_process	immune response
z	0019882	biological_process	antigen processing and presentation

Functional Information from PROSITE/UniProt

site_id	PS00989
Number of Residues	11
Details	CLAT_ADAPTOR_S Clathrin adaptor complexes small chain signature. LVYKryasLYF

Chain	Residue	Details
t	LEU57-PHE67

---

site_id	PS00990
Number of Residues	21
Details	CLAT_ADAPTOR_M_1 Clathrin adaptor complexes medium chain signature 1. VSWRse.GikYrkNeVFLDVIE

Chain	Residue	Details
m	VAL157-GLU177

---

site_id	PS00991
Number of Residues	15
Details	CLAT_ADAPTOR_M_2 Clathrin adaptor complexes medium chain signature 2. IsFIPPdGeFeLmsY

Chain	Residue	Details
m	ILE253-TYR267

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	6
Details	MOD_RES: N-acetylserine => ECO:0000250|UniProtKB:Q9BXS5

Chain	Residue	Details
M	SER2
i	SER2
j	SER2
k	SER2
l	SER2
m	SER2
x	SER350
x	SER352
y	SER343
y	GLY349
y	SER350
y	SER352
z	SER343
z	GLY349
z	SER350
z	SER352
0	SER343
0	GLY349
0	SER350
0	SER352
1	SER343
1	GLY349
1	SER350
1	SER352

---

site_id	SWS_FT_FI2
Number of Residues	12
Details	MOD_RES: Phosphothreonine => ECO:0007744|PubMed:17242355, ECO:0007744|PubMed:21183079

Chain	Residue	Details
M	THR152
M	THR154
i	THR152
i	THR154
j	THR152
j	THR154
k	THR152
k	THR154
l	THR152
l	THR154
m	THR152
m	THR154

---

site_id	SWS_FT_FI3
Number of Residues	6
Details	MOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:Q32Q06

Chain	Residue	Details
M	THR223
i	THR223
j	THR223
k	THR223
l	THR223
m	THR223
z	SER356
z	SER359
0	SER356
0	SER359
1	SER356
1	SER359

---